TCONS_00015904-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015904-protein
Unique NameTCONS_00015904-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length645

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015904-protein ID=TCONS_00015904-protein|Name=TCONS_00015904-protein|organism=Clytia hemisphaerica|type=polypeptide|length=645bp
MAARAAVRKDSTNSKFEELCHLWLFETVAYRFCRSFLDVENCFECLLHYG
SIWKHLIALDGHLQKQEPTSWHFFIDLIIQSFETGNEKGLLQLLNQVDKL
NFQNKDKRNLQLFLNTKVLLCYYEQGNIKKARQFLHNNDILHVQEISNLL
QQTDSTYPEVLDVKNLQAFIHPVIEELLQKVGKPKLYSLVSALLSENEKT
LKTQETQTEEHRPKDLLLSKSKSALDLVKQHKEANHTKSSSSFVMSPTGK
ILMSPSIASCAKISISDPALTPCKKNLWSKDQPDDIKDNKRPKSPRRSPR
KTRSSDIEKTVNFKLKLSLRSQKKNKPETTSETNRLSTKKAHKPQLEFTS
NNKKQKTQKSLEADIDFENENILPADDEESPDLFAKLQTSTQNEESNELH
SSNNSDILGDKRLTISISPIPTSYTYVTTLSQEQEEAIAAATKTTNDNKL
RFRTAKTRDQEKDENSSSSQESIGSKRKPSVAIPPLCHRPVDQKNPSTKS
SEAEESPYFNSSRKRPLDVTPEEKSSKKRSIPPPGAGRRRKDVTSNDGDE
DSGESITWESPENDSETQRTKAARQMCKRNNTSINTKRRGRVCFTKKEEE
NLLEGVKKYGFGCWAKILNNYHFNPCRTSVSLKDKYRTLQNQGKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008885XLOC_008885Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015904TCONS_00015904Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 590..642
e-value: 1.3E-7
score: 41.3
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 591..639
e-value: 6.3E-8
score: 32.6
NoneNo IPR availableGENE3D1.10.10.60coord: 580..644
e-value: 1.7E-9
score: 36.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 449..575
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..359
NoneNo IPR availableCDDcd11660SANT_TRFcoord: 594..641
e-value: 2.39621E-16
score: 72.9851
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 586..644
score: 15.27
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 594..641

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015904-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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