TCONS_00016381-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016381-protein
Unique NameTCONS_00016381-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length691

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016381-protein ID=TCONS_00016381-protein|Name=TCONS_00016381-protein|organism=Clytia hemisphaerica|type=polypeptide|length=691bp
MDWWQSLFSRARCAKAPLYDYAVKRANPQDLRVIFYKYASVEKNGERYLR
PTDLIRDLLNMDAATHNADTLSLLSGVVDQTKDGLISFEEFQAFEALLCN
VDAKYRLCFQMFDLDGKGTITFDEFKKMLSCQTTYAKYPFNFDCDFVRFY
FGKDLKYKVNYQEFTHLLQHLNKEYIKQLFRQKAGKNQLISTLQFAEIMK
VGCPHKLTPYIVDNMMAAVTAQSGSRTVSYIYCMAFYDMLQNLSVIQLLF
KDAADNNKFTGLTREELLQASVRYPAVSPLQLEILFDICTVANTGKGKIS
TIDLQPLQPQRDPMTVFSKIHEFKHYERMPGETGTEKVEQQWYMKVAQSG
YKFFLGSLAGATGAAFVYPIDLVKTRMQNQRSVLPGERLYQNSFDCFRKV
IKNEGPTGLYRGLVPQLIGVSPEKAIKLTTNDLVRYKFTDKDGEIRLIGE
IIAGGCGGGAQVMFTNPIEIVKIRMQVAGESGTQTSALKLVKELGFSGLY
KGARACFLRDIPFSSIYFPCYAHFKSGLADKNGYNSPISLLLAAAAAGVP
AAYLVTPADVIKTRLQVKARRGQQTYRGVIDCARKILQEEGATAFFKGGP
ARVFRSSPQFGVTLMTYELLQRVLYVDFGGGYTRTELTPRNPEVSLHPDH
IGGLRLAVASFSGIETKFGLMLPKFSPPPPSSENPVITSGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009143XLOC_009143Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016381TCONS_00016381Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002067Mit_carrier
IPR002048EF_hand_dom
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
IPR011992EF-hand-dom_pair
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002067Mitochondrial carrier proteinPRINTSPR00926MITOCARRIERcoord: 544..566
score: 22.74
coord: 365..379
score: 38.03
coord: 500..518
score: 25.8
coord: 460..478
score: 16.13
coord: 352..365
score: 24.71
coord: 412..432
score: 23.89
IPR002048EF-hand domainSMARTSM00054efh_1coord: 104..132
e-value: 1.4E-4
score: 31.2
coord: 70..98
e-value: 66.0
score: 3.1
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 78..94
e-value: 0.078
score: 12.4
IPR002048EF-hand domainPFAMPF00036EF-hand_1coord: 108..130
e-value: 5.6E-7
score: 28.6
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 158..174
score: 5.057
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 100..135
score: 13.928
IPR002048EF-hand domainCDDcd00051EFhcoord: 77..130
e-value: 4.24917E-7
score: 46.7721
NoneNo IPR availableGENE3D1.10.238.10coord: 88..116
e-value: 4.4E-11
score: 42.0
NoneNo IPR availableGENE3D1.10.238.10coord: 26..87
e-value: 0.0027
score: 17.3
NoneNo IPR availableGENE3D1.10.238.10coord: 117..305
e-value: 4.6E-8
score: 32.6
IPR023395Mitochondrial carrier domainGENE3D1.50.40.10coord: 344..624
e-value: 2.7E-90
score: 301.6
IPR023395Mitochondrial carrier domainSUPERFAMILY103506Mitochondrial carriercoord: 351..620
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 537..625
e-value: 1.1E-21
score: 76.4
coord: 351..440
e-value: 3.9E-24
score: 84.3
coord: 445..531
e-value: 4.1E-17
score: 61.8
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 347..437
score: 25.774
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 535..623
score: 24.83
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 445..527
score: 18.415
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 27..170

Blast
[Close]
BLAST of TCONS_00016381-protein vs. Swiss-Prot (Human)
Match: CMC1 (Calcium-binding mitochondrial carrier protein Aralar1 OS=Homo sapiens GN=SLC25A12 PE=1 SV=2)

HSP 1 Score: 660.218 bits (1702), Expect = 0.000e+0
Identity = 342/672 (50.89%), Postives = 466/672 (69.35%), Query Frame = 0 
Query:   24 KRANPQDLRVIFYKYASVEKNGERYLRPTDLIRDLLNM-DAATHNADTLSLLSGVVDQTKDGLISFEEFQAFEALLCNVDAKYRLCFQMFDLDGKGTITFDEFKKMLSCQTTYAKYPFNFDCDFVRFYFGKDLKYKVNYQEFTHLLQHLNKEYIKQLFRQK-AGKNQLISTLQFAEIMKVGCPHKLTPYIVDNMMAAVTAQSGSRTVSYIYCMAFYDMLQNLSVIQLLFKDAADNNKFTGLTREELLQASVRYPAVSPLQLEILFDICTVANTGKGKISTIDLQPLQPQRDPMTVFSKIHEFKHYERMPGETGTEKVEQQWYMKVAQSGYKFFLGSLAGATGAAFVYPIDLVKTRMQNQRSV--LPGERLYQNSFDCFRKVIKNEGPTGLYRGLVPQLIGVSPEKAIKLTTNDLVRYKFTDKDGEIRLIGEIIAGGCGGGAQVMFTNPIEIVKIRMQVAGE--SGTQTSALKLVKELGFSGLYKGARACFLRDIPFSSIYFPCYAHFKSGLADKNGYNSPISLLLAAAAAGVPAAYLVTPADVIKTRLQVKARRGQQTYRGVIDCARKILQEEGATAFFKGGPARVFRSSPQFGVTLMTYELLQRVLYVDFGG-GYTRTELTPRNPEVSL---HPDHIGGLRLAVASFSGIETKFGLMLPKFSPPPPSSENP 685
            KR +P +LR IF +YAS E +GERY+ P D ++  L + +    N   + LL+GV DQTKDGLIS++EF AFE++LC  D+ + + FQ+FD  G G +TF+  K++      +   PFN+DC+F+R +FG + K  +NY EFT  LQ L  E+ +Q F  K   K+ +IS L F++IM     H LTP++ +N+++A    S S  VS+ Y  AF  +L N+ +++ ++   A   K   +T+EE  Q+++RY  V+PL+++IL+ +  + N   G+++  D++ + P  +    ++ + E +  ++ PG      + +  ++++A+S Y+F LGS+AGA GA  VYPIDLVKTRMQNQR    + GE +Y+NSFDCF+KV++ EG  GLYRGL+PQLIGV+PEKAIKLT ND VR KFT +DG + L  E++AGGC GG+QV+FTNP+EIVKIR+QVAGE  +G + SAL ++++LG  GLYKGA+ACFLRDIPFS+IYFP YAH K  LAD+NG+   ++LL A A AGVPAA LVTPADVIKTRLQV AR GQ TY GVIDC RKIL+EEG +AF+KG  ARVFRSSPQFGVTL+TYELLQR  Y+DFGG     +E TP++    L   +PDHIGG RLA A+F+GIE KFGL LPKF  P  +   P
Sbjct:    9 KRGDPHELRNIFLQYASTEVDGERYMTPEDFVQRYLGLYNDPNSNPKIVQLLAGVADQTKDGLISYQEFLAFESVLCAPDSMFIVAFQLFDKSGNGEVTFENVKEIFGQTIIHHHIPFNWDCEFIRLHFGHNRKKHLNYTEFTQFLQELQLEHARQAFALKDKSKSGMISGLDFSDIMVTIRSHMLTPFVEENLVSAAGG-SISHQVSFSYFNAFNSLLNNMELVRKIYSTLAGTRKDVEVTKEEFAQSAIRYGQVTPLEIDILYQLADLYN-ASGRLTLADIERIAPLAEGALPYN-LAELQR-QQSPG------LGRPIWLQIAESAYRFTLGSVAGAVGATAVYPIDLVKTRMQNQRGSGSVVGELMYKNSFDCFKKVLRYEGFFGLYRGLIPQLIGVAPEKAIKLTVNDFVRDKFTRRDGSVPLPAEVLAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALNVLRDLGIFGLYKGAKACFLRDIPFSAIYFPVYAHCKLLLADENGHVGGLNLLAAGAMAGVPAASLVTPADVIKTRLQVAARAGQTTYSGVIDCFRKILREEGPSAFWKGTAARVFRSSPQFGVTLVTYELLQRWFYIDFGGLKPAGSEPTPKSRIADLPPANPDHIGGYRLATATFAGIENKFGLYLPKFKSPSVAVVQP 670
The following BLAST results are available for this feature:
BLAST of TCONS_00016381-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CMC10.000e+050.89Calcium-binding mitochondrial carrier protein Aral... [more]
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