TCONS_00016792-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016792-protein
Unique NameTCONS_00016792-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1399

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016792-protein ID=TCONS_00016792-protein|Name=TCONS_00016792-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1399bp
MWVKPQEVLIANAFWETERANPFFTLQKRKGHGGGGGFTSLLLGTLDNVL
DNKPPPYRILLQLADSDVCYLIANSSSKSEIEEDWQWLLKHLVNTIENFE
TSDDMREFVKAKIESLVASQQLHNVVNNPESDGEKFVSATARFKRLFGMP
EEEKLVNYYSCSYWKGKVPRQGWMYLSVNHLCFYSFLLGKEARVVLAWTD
VTSLERTSGVVLPDGIKVTTRTTDYYFSMFLNCSETFDLIEQLANMGMKR
LLSEEMSIDQDRSITIVSRGKKNKKKSKKLGPQLKRDLDARAKSEHYRRI
FHLSKEEKLDGSLYCTLWSPFSKAHMWGDLYISPNYICFESKIKQLCSVI
IPMREVSVVEKMTTTSIVPNAVHITTKSKMTFLFASLKDREFLMEKISDF
LSKTPVTTILEEPPMGDVNDQTTQFQPALKTVFCPVSEAGIPVKESVKEH
LWSMHFSEYGRGICMYRTPKTHELVLKGIPDSLRGEIWSLFSGAVNELAN
NPGYYSQLVKESIGKMLTTAEEIERDLHRSLPGHPAFQSEVGIAALRRVL
TAYAYRNPSIGYCQAMNIVASVLLLYCTEEEAFWLLTCVCENMLPDYYNT
KVVGALVDQAVFEVLTEDYIPDLHAHLKKVGVLSMISLSWFLTIFISVVP
LSCAVHILDCFFYDGAKVLFQLALTILEANKARLMACHDDGEAMTVLSAY
FERVISRDASNILEKTSTYKHERVTNGPDVDINDIIVVSYRKFGFLTTEN
IDKQRNQQRLRVVQHLEDGVKRNVIRSLASDVSFPANELEGLFGIFKSAN
MKSRYWGDKNKKVDYPAEYSSWRDPHEGIWIDALRFQQLFFVLTPWGASE
MGEALAERCFRVVDTNSDGRINFKEFTLIFEKICRGDITHKMRLLYEMHL
PPALLPEEIAELSRKENERFDVVETAAEVTEEGANSSPPIGSHEESLLVI
RTKQVIPSKGRIEDKEEIVMSPTGTPDSPPLHHNTPMQDIHPVLKRSGRV
LSSSSKDELLKALSTERLERLSLSSSSTCQSHESECDVSGQGAECNDSGQ
EGDVFGDNTLNDTSNLMDQIADAMNENDTETRKNELVKESETLQKNTADK
ELETSSQKENIRFEADEDEDFELNTGNLVRLSSTGSEARMKVKKFVESMI
DHRKDEDGDGDLPDMNQAQFIELWKSFFSLFREDPGQEQTLYQSIAKCGT
LLLQIGDVAKEASSPAPDISGLSITADSLNSGRNDNFVFVPQQLIDSNSS
SLSSSTDFLNVKHSSTASDDGGNGMRKAVEHHLGSSTPIKIETGSSSHSV
QNRHSSENATYQDSISTSSPKRDTPTDSFGPSHATDNLNSPGGQSVGALD
RDWKIRYRQFLACMLSEPVLIEYFENIFDMVAAIERYKVEFEYKQIQSP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009401XLOC_009401Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016792TCONS_00016792Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR002048EF_hand_dom
IPR004182GRAM
IPR011993PH_dom-like
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1076..1103
NoneNo IPR availableGENE3D1.10.238.10coord: 770..1381
e-value: 1.4E-15
score: 56.6
NoneNo IPR availableGENE3D1.10.10.750coord: 447..485
e-value: 6.0E-10
score: 38.4
NoneNo IPR availableGENE3D1.10.8.270coord: 486..591
e-value: 4.1E-25
score: 87.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1076..1107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1285..1345
NoneNo IPR availableCDDcd13354PH-GRAM2_TCB1D9_TCB1D9Bcoord: 306..401
e-value: 1.18795E-47
score: 165.897
NoneNo IPR availableCDDcd13351PH-GRAM1_TCB1D9_TCB1D9Bcoord: 152..250
e-value: 2.16992E-60
score: 202.237
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 475..688
e-value: 3.8E-61
score: 219.1
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 481..685
e-value: 8.7E-47
score: 159.5
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 478..665
score: 34.702
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 451..626
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 606..713
IPR002048EF-hand domainSMARTSM00054efh_1coord: 855..883
e-value: 0.0039
score: 26.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 851..886
score: 12.672
IPR004182GRAM domainSMARTSM00568gram2001ccoord: 141..208
e-value: 5.1E-27
score: 105.8
coord: 295..363
e-value: 3.3E-16
score: 69.8
IPR004182GRAM domainPFAMPF02893GRAMcoord: 142..245
e-value: 1.3E-20
score: 73.2
coord: 297..403
e-value: 4.9E-16
score: 58.5
IPR011993PH domain-likeGENE3D2.30.29.30coord: 303..403
e-value: 0.21
score: 11.3
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 864..876
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 770..899

Blast
[Close]
BLAST of TCONS_00016792-protein vs. Swiss-Prot (Human)
Match: TBCD9 (TBC1 domain family member 9 OS=Homo sapiens GN=TBC1D9 PE=2 SV=2)

HSP 1 Score: 939.873 bits (2428), Expect = 0.000e+0
Identity = 487/954 (51.05%), Postives = 648/954 (67.92%), Query Frame = 0 
Query:    1 MWVKPQEVLIANAFWETERANPFFTLQKRKGHGGGGGFTSLLLGTL----DNVLDN--KPPPYRILLQLADSDVCYLIANSSSKSEIEEDWQWLLKHLVNTIENFETSDDMREFVKAKIESLVASQQLHNVVNN--PESDGEKFVSATARFKRLFGMPEEEKLVNYYSCSYWKGKVPRQGWMYLSVNHLCFYSFLLGKEARVVLAWTDVTSLERTSGVVLPDGIKVTTRTTDYYFSMFLNCSETFDLIEQLANMGMKRLLSEEMSIDQDRSITIVSRGKKNKKKSKKLGPQLKRDLDARAKSEHYRRIFHLSKEEKLDGSLYCTLWSPFSKAHMWGDLYISPNYICFESKIKQLCSVIIPMREVSVVEKMTTTSIVPNAVHITTKSKMTFLFASLKDREFLMEKISDFLSKTPVTTILEEPPMGDVN--------------------------DQTTQFQ------PALKTVFCPVSEAGIP-------VKESVKEHLWSMHFSEYGRGICMYRTPKTHELVLKGIPDSLRGEIWSLFSGAVNELANNPGYYSQLVKESIGKMLTTAEEIERDLHRSLPGHPAFQSEVGIAALRRVLTAYAYRNPSIGYCQAMNIVASVLLLYCTEEEAFWLLTCVCENMLPDYYNTKVVGALVDQAVFEVLTEDYIPDLHAHLKKVGVLSMISLSWFLTIFISVVPLSCAVHILDCFFYDGAKVLFQLALTILEANKARLMACHDDGEAMTVLSAYFERVISRDAS-NILEKTSTYKHERVTNGPDVDINDIIVVSYRKFGFLTTENIDKQRNQQRLRVVQHLEDGVKRNVIRSLASDVSFPANELEGLFGIFKSANMKSRYWGDKNKKVDYPAEYSSWRDPH----EGIWIDALRFQQLFFVLTPWGASEMGEALAERCFRVVDTNSDGRINFKEFTLIFEKICRGDITHKMRLLYEMHLPP 902
            MWV P+EVL+ANA W TERANP+F LQ+RKGH G GG    L G L    D VLD+  +  PYRIL Q  DS V + IA   S+ EI E W+WL ++L+ T+  FE  +D+  FV+ KI+ ++A    +N +N+   + D EKF  A  +F RLFGMPEEEKLVNYYSCSYWKGKVPRQGWMYLS+NHLCFYSFL+G+EA++V+ W D+T LE+ + ++LPD IKV+TR+++++FS+FLN +ETF L+EQLAN+ M++LL  E   +QDRS+       K K+KS K    LKRDLDARAKSE YR +F L K+EKLDG   CTLW+PF+K H+ G +++S NYICF SK + LCS+IIP+REV++VEK  ++S++P+ + I+T+++MTFLFA+LKDR+FL+++ISDFL +T      ++   G  N                          D   QF       P        +     P        KE +KE  W +HF+EYG+GICMYRT KT ELVLKGIP+S+RGE+W L SGA+NE A +PGYY  LV++S+GK     EEIERDLHRSLP HPAFQ+E+GIAALRRVLTAYA+RNP+IGYCQAMNIV SVLLLY  EEEAFWLL  +CE MLPDYYNT+VVGALVDQ VFE L  DY+P L+  ++ +GV+S ISLSWFLT+F+SV+P   AV ++DCFFY+G KV+FQLAL +L+AN  +L+ C DDGEAMTVL  Y + V ++D++   +    +   + V   P+VDI  +I  SY KFG +  + I++ R +QRL+V+Q LED  KRNV+R++ ++ SF  +ELE L+ +FK+ ++ S YWG  +  +D         DP     E   ID  +F+ +F +L PW      + LA R F+++D N D  INF+EF       C GD+T K++LLY+MH+ P
Sbjct:    1 MWVNPEEVLLANALWITERANPYFILQRRKGHAGDGGGGGGLAGLLVGTLDVVLDSSARVAPYRILYQTPDSLVYWTIACGGSRKEITEHWEWLEQNLLQTLSIFENENDITTFVRGKIQGIIAE---YNKINDVKEDDDTEKFKEAIVKFHRLFGMPEEEKLVNYYSCSYWKGKVPRQGWMYLSINHLCFYSFLMGREAKLVIRWVDITQLEKNATLLLPDVIKVSTRSSEHFFSVFLNINETFKLMEQLANIAMRQLLDNE-GFEQDRSL------PKLKRKSPKKVSALKRDLDARAKSERYRALFRLPKDEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEENLCSLIIPLREVTIVEKADSSSVLPSPLSISTRNRMTFLFANLKDRDFLVQRISDFLQQTTSKIYSDKEFAGSYNSSDDEVYSRPSSLVSSSPQRSTSSDADGERQFNLNGNSVPTATQTLMTMYRRRSPEEFNPKLAKEFLKEQAWKIHFAEYGQGICMYRTEKTRELVLKGIPESMRGELWLLLSGAINEKATHPGYYEDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQAMNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARDYVPQLYDCMQDLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALAVLDANVDKLLNCKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLSDDVEPYPEVDIFRLIRTSYEKFGTIRADLIEQMRFKQRLKVIQTLEDTTKRNVVRTIVTETSFTIDELEELYALFKAEHLTSCYWGGSSNALDR-------HDPSLPYLEQYRIDFEQFKGMFALLFPWACGTHSDVLASRLFQLLDENGDSLINFREFVSGLSAACHGDLTEKLKLLYKMHVLP 937
The following BLAST results are available for this feature:
BLAST of TCONS_00016792-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBCD90.000e+051.05TBC1 domain family member 9 OS=Homo sapiens GN=TBC... [more]
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