TCONS_00016883-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016883-protein
Unique NameTCONS_00016883-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length748

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016883-protein ID=TCONS_00016883-protein|Name=TCONS_00016883-protein|organism=Clytia hemisphaerica|type=polypeptide|length=748bp
MYYLTWTLLFTIWTLNLSTNGYKISTIDKEMVEDLRKDESAFDTIARNNM
KFERNAEETHTPEENLDKTTQKKNTHLFESDIILEDIPENEGGEVGKQSY
KRALRRSQHYLWIDRVIPYEITPFTEAGRANIEKAMKGLQDQSCLTFREK
QDGDKNWIKFDDFGSCSSSVGRSFWRDGPQTISLSENCWNSMGTIQHEIL
HALGFWHEQSRNDRDKYVEILWENISPGKENNFEKYDRQSSKNMNSVYDP
SSLMHYGKYSFSENGKPTIQLINDPNHSIGQRVGPSAEDLVQLNALYHCQ
DVGKTYSSWSSWSPCDRKNNCYKQRQRFCSNHNVKKCPYADPYGIETESA
TCTQEECNAPVDGHWGKWSAWSDCSAPCGQGTQQRSRTCSDPEPLNDGKA
CPGDDKQSKSCEIQPCGLNPDDCLFDGQGTCSDIWSIDDKFPGYNANYIW
RRIKGRTPSGSTGPNHDHSTAETTKDGHYMYAESSGPARTGNKASLVSKE
FPAISHRCMTFFYSMYGSGVGVLRIILQKGGVEEEIWKKEGNQQENWHEA
EVEFSPGSYNYKIRIEAERGANFQGDIGLDDIHFRDSACSVTTVTIAPAV
FSTNPVIESQHVSEPHLTIPGPLVHDCEGVTMSLIPKGCYKDNDSNRIFP
IKIADHRDGPTKLDWNNYPASLSKLVCECAKKAKNQGYKYFGLQYYGLCM
SGSSHTFDQYGASGKCVDDQYATTCEKGGKTDSICMGQEHTNYVYQIA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009449XLOC_009449Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016883TCONS_00016883Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR000998MAM_dom
IPR006026Peptidase_Metallo
IPR000884TSP1_rpt
IPR024079MetalloPept_cat_dom
IPR034035Astacin-like_dom
IPR013320ConA-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0016020 membrane
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01705TSP1REPEATcoord: 381..392
score: 43.6
coord: 400..411
score: 31.99
coord: 363..376
score: 49.68
NoneNo IPR availableGENE3D2.30.90.10coord: 305..357
e-value: 0.0065
score: 16.5
NoneNo IPR availableGENE3D2.60.120.200coord: 418..591
e-value: 6.5E-40
score: 136.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..475
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 108..299
IPR001506Peptidase M12APRINTSPR00480ASTACINcoord: 208..225
score: 54.54
coord: 189..207
score: 49.82
coord: 285..298
score: 36.07
coord: 132..150
score: 27.72
coord: 247..262
score: 49.58
IPR001506Peptidase M12APFAMPF01400Astacincoord: 111..300
e-value: 4.3E-57
score: 192.7
IPR000998MAM domainSMARTSM00137MAM_2coord: 418..591
e-value: 5.2E-30
score: 115.7
IPR000998MAM domainPFAMPF00629MAMcoord: 444..590
e-value: 2.2E-33
score: 115.3
IPR000998MAM domainPROSITEPS00740MAM_1coord: 477..517
IPR000998MAM domainPROSITEPS50060MAM_2coord: 421..591
score: 28.218
IPR000998MAM domainCDDcd06263MAMcoord: 423..589
e-value: 5.46023E-39
score: 140.976
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 108..250
e-value: 6.6E-39
score: 145.3
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 365..417
e-value: 1.2E-14
score: 64.7
coord: 306..358
e-value: 0.0013
score: 28.0
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 361..416
e-value: 6.0E-18
score: 64.4
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 367..416
e-value: 9.6E-13
score: 48.0
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 303..358
score: 8.094
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 362..417
score: 14.189
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 360..416
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 103..301
e-value: 5.9E-54
score: 182.5
IPR034035Astacin-like metallopeptidase domainCDDcd04280ZnMc_astacin_likecoord: 114..297
e-value: 5.21248E-71
score: 230.536
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 421..589

Blast
[Close]
BLAST of TCONS_00016883-protein vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 2.062e-33
Identity = 88/225 (39.11%), Postives = 123/225 (54.67%), Query Frame = 0 
Query:   77 LFESDIILEDIPENEGGEVGKQSYKRALRRSQHYLWIDRVIPYEITPFTEA-GRANIEKAMKGLQDQSCLTFREKQDGDKNWIKFDDFGSCSSSVGRSFWRDGPQTISLSENCWNSMGTIQHEILHALGFWHEQSRNDRDKYVEILWENISPGKENNFEKYDRQSSKNMNSVYDPSSLMHYGKYSFSENGKPTIQL-INDPNHSIGQRVGPSAEDLVQLNALYHC 299
            LFE DI L D  +     +G++           Y W    IPY +    E   +  I  A +  + ++C+ F+    G+ N+I       C SSVG    R G Q +S+  NC + + T+QHE LHALGFWHEQSR+DRD YV I+W+ I  G+E+NF  Y    S ++N  YD +S+MHY K +F    +PTI   I+D    IGQR+  S  DL++LN LY+C
Sbjct:   48 LFEGDIRL-DRAQIRNSIIGEK-----------YRW-PHTIPYVLEDSLEMNAKGVILNAFERYRLKTCIDFKPWA-GETNYISVFKGSGCWSSVGNR--RVGKQELSIGANC-DRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLYNC 255
The following BLAST results are available for this feature:
BLAST of TCONS_00016883-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B2.062e-3339.11Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
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