TCONS_00016929-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016929-protein
Unique NameTCONS_00016929-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length728

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016929-protein ID=TCONS_00016929-protein|Name=TCONS_00016929-protein|organism=Clytia hemisphaerica|type=polypeptide|length=728bp
IGSFKMEKEKGNTTPGKQRKCFSMDDTTIEKLIHQERLSQQTKLLNMSMN
SLPMVSDRMLLNFLSKQTSKVKASELCKIAREINSSQPDDLSLNLIEHKK
VIEGQKYHSWPKNNLKNFEEKHAVKYHNYGLQEEENEHLEESSDDLLGIQ
TTGSNTARSWASPSELNVIDGKNYKKTLQTAERKRRHSCPCLPNRMTFNK
QTVLNAYSSLMDICKSVESDDFVATENLEVILNNDFKSKFQNTQNFEETP
PQRRCSLDEKIDDFDQVYNSVFKHAFSHHDVGVEPPLFKKRADVMMQWFS
GFSNEQKNIFIQKILESSELPQMHMLSLKMENNLHKNCPLNCRDMLQWLP
ENVVYQILDQLDPISLSNACQVNRVWHEYGMHHHLWKKFCRHPDYQLSSQ
RQREQILKFTNVNGTVRWREVFVERYCLRRNWMTGRCKVKTLTGHTQGVS
CVQFDQSRIVSGSSDKTIRVWDLTSSSQDPVLHLVGHSGTVRCLQLIGNR
LVSGSTDTTIKVWDLSVGSDWNMAGCRVTMIGHFDTVRCLQVDADKVISG
SYDKTLKVWDLKTGNCKLTLRGHSEAVLCVQFDDQKIVSGSSDKTIKVWS
LFTGVCLSTFQGHDDAVTCLQFNHSHVISGSLDCTLKFWNLHSGKCIGTI
DWIRSEGHTRVVRCLQADRWKIVSAGDDKTLKIWCLESGERFVTLHKHTD
GVTCLRFDDFMIVSGSYDKTVKVWDFVP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009482XLOC_009482Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016929TCONS_00016929Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001810F-box_dom
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 501..515
score: 45.38
coord: 547..561
score: 40.16
coord: 459..473
score: 43.76
IPR001810F-box domainSMARTSM00256fbox_2coord: 349..389
e-value: 1.5E-5
score: 34.5
IPR001810F-box domainPFAMPF12937F-box-likecoord: 349..391
e-value: 1.3E-6
score: 28.1
IPR001810F-box domainPROSITEPS50181FBOXcoord: 343..389
score: 10.504
IPR001810F-box domainSUPERFAMILY81383F-box domaincoord: 335..431
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 643..685
e-value: 0.0069
score: 25.6
coord: 603..640
e-value: 2.5E-9
score: 47.0
coord: 688..725
e-value: 8.7E-8
score: 41.9
coord: 435..472
e-value: 2.8E-9
score: 46.8
coord: 563..600
e-value: 8.4E-9
score: 45.2
coord: 523..560
e-value: 1.0E-4
score: 31.7
coord: 477..514
e-value: 5.1E-6
score: 36.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 645..684
e-value: 0.074
score: 13.9
coord: 438..472
e-value: 4.8E-7
score: 30.3
coord: 528..560
e-value: 1.1E-4
score: 22.8
coord: 479..514
e-value: 5.6E-5
score: 23.7
coord: 564..600
e-value: 6.0E-6
score: 26.8
coord: 694..725
e-value: 1.2E-4
score: 22.7
coord: 604..640
e-value: 2.7E-6
score: 27.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 570..609
score: 13.75
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 442..481
score: 15.087
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 655..694
score: 9.406
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 695..728
score: 13.115
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 530..569
score: 12.848
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 484..516
score: 12.38
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 610..649
score: 13.316
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 615..680
e-value: 1.4E-17
score: 63.4
NoneNo IPR availableGENE3D1.10.10.670coord: 510..532
e-value: 1.1E-5
score: 24.8
coord: 681..727
e-value: 1.6E-13
score: 49.9
coord: 470..509
e-value: 6.5E-14
score: 51.1
coord: 555..577
e-value: 4.3E-11
score: 42.1
NoneNo IPR availableGENE3D1.20.1280.50coord: 343..442
e-value: 4.1E-17
score: 62.0
NoneNo IPR availableGENE3D2.140.10.30coord: 443..469
e-value: 2.6E-9
score: 36.0
NoneNo IPR availableGENE3D2.40.50.140coord: 533..554
e-value: 4.3E-7
score: 29.0
NoneNo IPR availableGENE3D2.80.10.50coord: 578..614
e-value: 1.8E-17
score: 63.2
NoneNo IPR availableCDDcd00200WD40coord: 439..725
e-value: 3.36213E-79
score: 256.108
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 501..515
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 627..641
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 712..726
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 459..473
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 547..561
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 442..728
score: 63.381
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 439..723

Blast
[Close]
BLAST of TCONS_00016929-protein vs. Swiss-Prot (Human)
Match: FBXW7 (F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 5.412e-77
Identity = 155/449 (34.52%), Postives = 246/449 (54.79%), Query Frame = 0 
Query:  283 VEPPLFKKRADVMMQWFSGFSNEQKNIFIQKILESSELPQMHMLSLKMENNLHKNCPLNCRDMLQWLPENVVYQILDQLDPISLSNACQVNRVWHEYGMHHHLWKKFCRHPDYQLSSQRQREQILKFTNVNGTVRWREVFVERYCLRRNWMTGRCK-VKTLTGHTQGV-SCVQFDQSRIVSGSSDKTIRVWDLTSSSQDPVLHLVGHSGTVRCLQLIGNRLVSGSTDTTIKVWDLSVGSDWNMAGCRVTMIGHFDTVRCLQVDADKVISGSYDKTLKVWDLKTGNCKLTLRGHSEAVLCVQFDDQKIVSGSSDKTIKVWSLFTGVCLSTFQGHDDAVTCLQFNHSHVISGSLDCTLKFWNLHSGKCIGTIDWIRSEGHTRVVRCLQADRWKIVSAGDDKTLKIWCLESGERFVTL---HKHTDGVTCLRFDDFMIVSGSYDKTVKVWDF 726
            V+PP   +     ++ F  +S  +K + + ++++S E  Q+  +   +E       P   RD +  LP+ +   +L  L+P  L  A Q  R W      + LW++ C+          +R +++K   ++    W+  ++ ++ +  NW  G  K  K L GH   V +C+QF  +RIVSGS D T++VW  ++ +   +  LVGH+G V   Q+  N ++SGSTD T+KVW+   G       C  T+ GH  TVRC+ +   +V+SGS D TL+VWD++TG C   L GH  AV CVQ+D +++VSG+ D  +KVW   T  CL T QGH + V  LQF+  HV+SGSLD +++ W++ +G CI T+      GH  +   ++     +VS   D T+KIW +++G+   TL   +KH   VTCL+F+   +++ S D TVK+WD 
Sbjct:  228 VQPPTGLQE---WLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIE-------PQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSP--WKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW--SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGE------CIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL-----TGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 651

HSP 2 Score: 187.193 bits (474), Expect = 3.445e-50
Identity = 107/249 (42.97%), Postives = 147/249 (59.04%), Query Frame = 0 
Query:  431 NWMTGRCKVKTLTGHTQGVSCVQFDQSRIVSGSSDKTIRVWDLTSSSQDPVLH-LVGHSGTVRCLQLIGNRLVSGSTDTTIKVWDLSVGSDWNMAGCRVTMIGHFDTVRCLQVDADKVISGSYDKTLKVWDLKTGNCKLTLRGHSEAVLCVQFDDQKIVSGSSDKTIKVWSLFTGVCLSTFQG---HDDAVTCLQFNHSHVISGSLDCTLKFWNLHSGKCIGTIDWIRSEGHTRVVRCLQADRWKIVSA 675
            N  TG C + TL GHT  V C+   + R+VSGS D T+RVWD+ +      LH L+GH   VRC+Q  G R+VSG+ D  +KVWD    +      C  T+ GH + V  LQ D   V+SGS D +++VWD++TGNC  TL GH      ++  D  +VSG++D T+K+W + TG CL T QG   H  AVTCLQFN + VI+ S D T+K W+L +G+ I  +  + S G   VV  ++A   K+V A
Sbjct:  447 NAETGEC-IHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQ---CLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET------CLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCA 685
The following BLAST results are available for this feature:
BLAST of TCONS_00016929-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBXW75.412e-7734.52F-box/WD repeat-containing protein 7 OS=Homo sapie... [more]
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