TCONS_00017165-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017165-protein
Unique NameTCONS_00017165-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1099

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017165-protein ID=TCONS_00017165-protein|Name=TCONS_00017165-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1099bp
AAIFYFQSAVCSNIDIQSFANSFDDFLKEHLKYDKIESELKKVKYIKRKA
DSAELVETFKTNLETLFKEKEKILDGIKTSIENAKLNYTSSPTSNDFVQE
FDYNNMRDEGSNKRVGFVDDFSTEFKVNLTHSFVQVPTNIYKFKQSVLQQ
VEWSQHVDSTFQQNYEKNSNLQYQYYGDSSGVFRIFPGNVMPVKEEADLF
DCRRRIWYIQASTSPKDIVIVIDYSGSMIGNNIGIAKITTSSLIDTLQEN
DYFNVITINKDVTYLMPCVTHLVQATKENKEMFKNAVSKLTEPTSIVDVD
FGMDEAFKIFNESKASARCNKAIMFVTDGIEGTYAGRASFERHNKDKKVR
VFSYLVGRIKNPDQEALVKMACDNNGHFYSINTLGNVWDTVLDYLRVMSR
PITHSLNEGSLKDEDIKTTFTSAYKDNAGFGMVMSASKSVFEKEKNSDGT
TKYKHLIGVAGTDISLKNLSSLAPYSKLGVFGRGFVINNNGFVLVHPNFR
QQKGYLPVPPNILIEDLEHCLDNSNHSMNLKENMLGKVDIDVSKEFSAYW
NFDDNKKYVKTFNQYAHDKIEGTDFVAAVAVTDLDKHYLDIDISDPAMKQ
FFTEGVKALDAPVIEKPETPSNETNATSSWQPPKNFTYVEIAPWNYCPEL
EQYIQRHGVLKPITARQMYEVLSNSTISIDTLCKSTEELLNRLLVPAGAI
DKIIKSEWTEKSGEFLDNLFIATSGGYQKMFAFTNKSQPFDRDVVRSKLF
ENVLSSAAKTDGSIDESIRMVFGTDPKDPHLDSNEPVEVTVTRPFWEQSV
LAAVSGITMRSDKLNQHFITQSYISQKYKEKNSSFVCAMIDDFGYIIASN
QGNKYTGRFIGERVSSIIPYLNMTRKVIKDTQAECEVPDDDNSSANLLLT
PAKLLVGCLSCLAKSVYWVTIQAVVLLVSLMQNQHEVSAGEHTKITVSCV
KEVEYFRLNRTLIETYGARMEDKTWDAFKCPGQCTGTNAPKFLIQVIPGT
NVYLLEMSIGSDDSEACDNKCFQDPYYPKREELRTPKAEWCVRNQQNATH
YRKQPIAKCYNETSKFDHAHMCGRASMAIPSFMTVGLLVLGAIWILIQK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009603XLOC_009603Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017165TCONS_00017165Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR013680VDCC_a2/dsu
IPR013608VWA_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 215..395
e-value: 4.0E-15
score: 66.3
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 217..385
e-value: 3.3E-15
score: 56.7
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 223..397
e-value: 1.0E-22
score: 80.5
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 217..395
score: 14.62
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 215..395
NoneNo IPR availableGENE3D3.30.450.20coord: 154..222
e-value: 0.033
score: 14.0
NoneNo IPR availableGENE3D3.30.450.20coord: 782..922
e-value: 0.054
score: 12.9
coord: 422..586
e-value: 3.7E-12
score: 45.8
IPR013680Voltage-dependent calcium channel, alpha-2/delta subunit, conserved regionPFAMPF08473VGCC_alpha2coord: 637..1068
e-value: 2.3E-12
score: 46.3
IPR013608VWA N-terminalPFAMPF08399VWA_Ncoord: 80..188
e-value: 1.4E-20
score: 73.9

Blast
BLAST of TCONS_00017165-protein vs. Swiss-Prot (Human)
Match: CA2D3 (Voltage-dependent calcium channel subunit alpha-2/delta-3 OS=Homo sapiens GN=CACNA2D3 PE=1 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 8.466e-94
Identity = 304/1085 (28.02%), Postives = 504/1085 (46.45%), Query Frame = 0
Query:   51 DSAELVETFKTNLETLFKEKEKILDGIKTSIENAKLNYT-SSPTSNDFVQEFDYNNMRDEGSNKRVG--FV---DDFSTEFKVNLTHSFVQVPTNIYKFKQSVLQQVEWSQHVDSTFQQNYEKNSNLQYQYYGDSSGVFRIFPGNVMPVKEEAD-----LFDCRRRIWYIQASTSPKDIVIVIDYSGSMIGNNIGIAKITTSSLIDTLQENDYFNVITINKDVTYLMPCVTH-LVQATKENKEMFKNAVSKLTEPTSIVDVDFGMDEAFKI---FNESKASARCNKAIMFVTDGIEGTYAGRASFERHN-KDKKVRVFSYLVGRIKNPDQEALVKMACDNNGHFYSINTLGNVWDTVLDYLRVMSRP-ITHSLNEGSLKDEDIKTTFTSAYK--DNAGFGMVMSASKSVFEK--EKNSDGTTKYKHLIGVAGTDISLKNLSSLAPYSKLGVFGRGFVINNNGFVLVHPNFR--QQKGYLPVPPNILIEDLEHCLDNSNHSMNLKENML----GKVDIDVSKEFSAYWNFDDNKKYVKTFNQYAHDKIEGTDFVAAVAVT-DLDKHYLDIDISDPAMKQFFTEGVKALDAPVIEKPETPSNETNATSSWQPPKNFTYVEIAPWNYCPELEQYIQRHGVLKPITARQMYEVLSNSTISIDTLCKSTEELLNRLLVPAGAIDKIIKSEWT-------EKSGEFLDNLFIATSGGYQKMFAFTNKSQPFDRDVVRSKLFENVLS----------SAAKTDGSIDESIRMVFGTDPKDPHLDSNEPVEVTVTRPFWEQSVLAAVSGITMRSDKLNQHFITQSYISQKYKEKNS------SFVCAMIDDFGYIIASNQGNKYTGRFIGERVSSIIPYL----NMTRKVIKDTQAECEVPDDDNSSANLLLTPAKLLVGCLSCLAKSVYWVTIQAVVLLV-----SLMQNQHEVSAGEHTKITVSCVKEVEYFRLNRTLIETYGARMEDKTWDAFKCPGQCTGTNAPKFLIQVIPGTNVYLLEMSIGSDDSEACDNKCFQDPYYPKREELRTPKAEWCVRNQQNATHYRKQPIAKCYNETSKFDHAHMCGRA 1075
            D  +LV+    N+E +F +K + +  +  + E A L +   +    ++      N    +G+   +G  F+   +D      VN++ S VQVPTN+Y    +++  V WS+ ++  F  N++++ +L +QY+G + G FR +PG    +K E D      FDCR R WYIQA+TSPKD+VI++D SGSM G  + IAK T SS++DTL ++D+FN+I  N+++ Y+ PC+   LVQA + NKE F+  + KL     I  +D  ++EAF I   FN +   + C++AIM +TDG   TY     F ++N  D+KVR+F+YL+GR +    + L  MAC N G F  I+TL +V + V++YL V+SRP +    ++    +  I +T   A K  D+ G  ++ + +  VF K  E  S G      L+GV GTD+ +K L    P  KLG+ G  F I NNG++L HP  R   ++G     PN    DL   ++  +    L+  M+    GK  ++V K        D  K+ +   N Y +  I+GT F   VA++    K++   +++         EG+  L+ P +   +                         W+YC        RH  L  + A ++Y          + L +  +EL+  +L  A  +   I++ WT       E S + ++  F+ T  G  ++  F    Q  ++D +++   EN+ +          +A +  GS   SI    G   K   + ++  +++   R   +  V+AAV GI M+ +   + F T S        K S      +  C +ID+ G+I+ S    + TG F GE   +++  L    +  R  + D QA C    + +  A+ LL P        +    +V W+  + V+ LV     S   +     A +  +    C  E   F   RT+ ET G            C   C+ +    F+IQ IP +N++++ +    D S  C++     P      E+R  ++  C R +  A   R++P   C+    + ++A  CG A
Sbjct:   83 DGLQLVKKLAKNMEEMFHKKSEAVRRLVEAAEEAHLKHEFDADLQYEYFNAVLINERDKDGNFLELGKEFILAPNDHFNNLPVNISLSDVQVPTNMYNKDPAIVNGVYWSESLNKVFVDNFDRDPSLIWQYFGSAKGFFRQYPG----IKWEPDENGVIAFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIAKQTVSSILDTLGDDDFFNIIAYNEELHYVEPCLNGTLVQADRTNKEHFREHLDKLF-AKGIGMLDIALNEAFNILSDFNHTGQGSICSQAIMLITDGAVDTY--DTIFAKYNWPDRKVRIFTYLIGR-EAAFADNLKWMACANKGFFTQISTLADVQENVMEYLHVLSRPKVIDQEHDVVWTEAYIDSTLPQAQKLTDDQGPVLMTTVAMPVFSKQNETRSKGI-----LLGVVGTDVPVKELLKTIPKYKLGIHGYAFAITNNGYILTHPELRLLYEEGKKRRKPNYSSVDLSE-VEWEDRDDVLRNAMVNRKTGKFSMEVKK------TVDKGKRVLVMTNDYYYTDIKGTPFSLGVALSRGHGKYFFRGNVT-------IEEGLHDLEHPDVSLADE------------------------WSYCNTDLHPEHRH--LSQLEAIKLY------LKGKEPLLQCDKELIQEVLFDA-VVSAPIEAYWTSLALNKSENSDKGVEVAFLGTRTGLSRINLFVGAEQLTNQDFLKAGDKENIFNADHFPLWYRRAAEQIPGSFVYSIPFSTGPVNKSNVVTASTSIQLLDER---KSPVVAAV-GIQMKLEFFQRKFWTASRQCASLDGKCSISCDDETVNCYLIDNNGFILVSEDYTQ-TGDFFGEIEGAVMNKLLTMGSFKRITLYDYQAMCRANKESSDGAHGLLDP-------YNAFLSAVKWIMTELVLFLVEFNLCSWWHSDMTAKAQKLKQTLEPCDTEYPAFVSERTIKETTG---------NIACE-DCSKS----FVIQQIPSSNLFMVVV----DSSCLCESVA---PITMAPIEIRYNESLKCERLK--AQKIRRRP-ESCHGFHPE-ENARECGGA 1070          
The following BLAST results are available for this feature:
BLAST of TCONS_00017165-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CA2D38.466e-9428.02Voltage-dependent calcium channel subunit alpha-2/... [more]
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