TCONS_00017325-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00017325-protein
Unique Name	TCONS_00017325-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	440

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00017325-protein ID=TCONS_00017325-protein|Name=TCONS_00017325-protein|organism=Clytia hemisphaerica|type=polypeptide|length=440bp
MHTLETLFSVLCLLTAVAYVQGHGNSNLYELLTDDKTTFLSKDFKHRVRR
TTIVEKGGEKINTTFAESEENDQNTNTTINTIDDHRYYTSKFTTRGQSYF
IDLTNGTESLPYEGLEIEKHEILSKAYLKAAFVALKFPFYFYGNKVQRVV
VTTGGFLSVGPLFHAYAHVVHYIAPLMANFNPSIDNSTEILVGSGKDIFI
VQWKNMQMNNTVDGSPKYDFQTILHENGTIVFAYKDVPVSPVKLPNDTHN
VTIGIADGLVLSFVYDKGGKIHFHNYIYSYHRISLPLRNPISGSAFILDL
EPTCIRQTTCGACLNKNNTRFNCKWCPSLQRCSNGLDWHRQSWMSRCAKT
AYDDPEKCSAQIPGKDTNTMTKKKQSSNNGALIGGIVGFLVIMVLLIILV
MFYYAYTHPQSSSGMWLIEHRPAVLFSKARFNKVPDDQLL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_009697	XLOC_009697	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00017325	TCONS_00017325	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.5.100		coord: 369..406 e-value: 3.9E-6 score: 25.9

Blast

[Close]

BLAST of TCONS_00017325-protein vs. Swiss-Prot (Human)
Match: PLDX1 (Plexin domain-containing protein 1 OS=Homo sapiens GN=PLXDC1 PE=1 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 4.878e-51
Identity = 126/410 (30.73%), Postives = 194/410 (47.32%), Query Frame = 0

Query:   76 NTTINTIDDHRYYTSKF----TTRGQSYFIDLTNGTESLPYEGLEIEKHEILSKAYLKAAFVALKFPFYFYGNKVQRVVVTTGGFLSVGPLFHAYAHVVHYIAPLMANFNPSI-DNSTEILVGSGKDIFIVQWKNMQMNNTVDGSPKYDFQTILHENGTIVFAYKDVPVSPVKLPNDTHNVTIGIADG-LVLSFVYDKGGKIHFHNYIYSYHRISLPLRNPISGSAFILDLEPTCIRQTTCGACLNKNNTRFNCKWCPSLQRCSNGLDWHRQSWMS-RCAKTA-------YDDPEKCSAQ--------------------IPGKDTNTMTKKKQSSNNGAL--------------IGGIVGF-LVIMVLLIILVMFYYAYTHPQSSSGMWLIEHRPAVLFSKARFNKVPD 436
            N T    D+H YY S+         +  ++D+     S      +++ H ILS  + +A+ V L F F FYG+ ++++ + TGGF+ +G + H       Y+APLMANFNP   DNST +   +G  +F+VQW ++ +    D    + FQ  LH +G IVFAYK++P+S  ++ +  H V  G++D  ++L+   D          I+ YHRI L      S SA      PTC++  +C AC++ + T FNC WC  LQRCS+G D +RQ WM   CA+ A       + D +  SA                     I    T   TK    +    L              +G IVG  L ++++  I++   Y   HP S++ ++ IE RP   +   +F   PD
Sbjct:   80 NRTRVVEDNHSYYVSRLYGPSEPHSRELWVDVAEANRS------QVKIHTILSNTHRQASRVVLSFDFPFYGHPLRQITIATGGFIFMGDVIHRMLTATQYVAPLMANFNPGYSDNSTVVYFDNGT-VFVVQWDHVYLQGWEDKG-SFTFQAALHHDGRIVFAYKEIPMSVPEISSSQHPVKTGLSDAFMILNPSPDVPES--RRRSIFEYHRIELDPSKVTSMSAVEFTPLPTCLQHRSCDACMSSDLT-FNCSWCHVLQRCSSGFDRYRQEWMDYGCAQEAEGRMCEDFQDEDHDSASPDTSFSPYDGDLTTTSSSLFIDSLTTEDDTKLNPYAGGDGLQNNLSPKTKGTPVHLGTIVGIVLAVLLVAAIILAGIYINGHPTSNAALFFIERRPH-HWPAMKFRSHPD 477

The following BLAST results are available for this feature:

BLAST of TCONS_00017325-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00017325-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PLDX1	4.878e-51	30.73	Plexin domain-containing protein 1 OS=Homo sapiens...	[more]

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TCONS_00017325-protein (polypeptide) - C. hemisphaerica