TCONS_00017364-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017364-protein
Unique NameTCONS_00017364-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length471

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017364-protein ID=TCONS_00017364-protein|Name=TCONS_00017364-protein|organism=Clytia hemisphaerica|type=polypeptide|length=471bp
MQPYDVPIISHDLRQEEFVLQIADTLEYLENVTEDIFNRITTRVTECQQR
LDMVNKRTDSAQAKINALKGSKKAIRVFSSSKYPAEEVSEVYKSIFDIEN
NLKEIQRSQLEISSKHKSADTNSIKDKLQFYSVNIKQNKKEDGEKKGEGL
GKLPKTIDTVSSLLLFNTAENPYKKYVIMDPLAGAVTKTRANMEEEEEDI
GAAPTTITNREELERGTADNYFYMPGLGNVPEIDVPNDLPDLPGVVDDIA
FSGDSGMSIAPSLPMNIPDLPTIGEDVPSLPDPSSTAPPPPPPPGGDSSA
PPPPPPPPPAAGAPPPPPPPPPPPPPTETAMPPPPPPPPMPDEEGGSKPE
GKPSDVPDEVTEDDGRAGLMAAIRGAGGKKGAKLKNAKERKKERKQEKAA
TSSGGGGGDLMSDLFSKLTMRRKGISGSKKEGREERSNADPAPMSPMDKI
SSMIPPPSKDRSESQDSGDWD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009721XLOC_009721Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017364TCONS_00017364Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021854WASH1_WAHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 281..293
score: 44.62
coord: 319..335
score: 55.29
coord: 298..319
score: 42.73
NoneNo IPR availableGENE3D1.10.287.500coord: 20..137
e-value: 3.8E-4
score: 19.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..471
IPR021854WASH1, WAHD domainPFAMPF11945WASH_WAHDcoord: 1..278
e-value: 7.3E-98
score: 327.6

Blast
[Close]
BLAST of TCONS_00017364-protein vs. Swiss-Prot (Human)
Match: WASH3 (Putative WAS protein family homolog 3 OS=Homo sapiens GN=WASH3P PE=1 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 5.834e-91
Identity = 191/433 (44.11%), Postives = 255/433 (58.89%), Query Frame = 0 
Query:    2 QPYDVPIISHDLRQEEFVLQIADTLEYLENVTEDIFNRITTRVTECQQRLDMVNKRTDSAQAKINALKGSKKAIRVFSSSKYPAEEVSEVYKSIFDIENNLKEIQRSQLEISSKHKSADTNSIKDKLQFYSVNIKQNKKEDGEKKGEGLGKLPKTIDTVSSLLLFNTAENPYKKYVIMDPLAGAVTKTRANM-EEEEEDIGAAPTTITNREELERGTADNYFYMPGLGNVPEIDVPNDLPDLPGVVDDIAFSGDSGMSIAPSLPMNIPDLPTIGEDVPS-----LPDPSSTAPPPPPPPGGDSSAPPPPPPPPPAAGAPPPPPPPPPPPPPTETAMPPPPPPPPMPDEEGGSKPEGKPSDVPDEVTEDDGRAGLMAAIRGAGGKKGAKLKNAKERK--KERKQEKAATSSGGGGGDLMSDLFSKLTMRRKGIS 426
            Q Y VP+I  DLR+EE V Q+AD L+YL+ V+ DIF+RI+ +V + + ++  + ++   AQAKI  +KGSKKAI+VFSS+KYPA E  + Y SIF    +    +R +  I SKH+  D  ++++K     V+ K   ++D E   EGLG LP  I +VSSLLLFNT EN  KKYV +DPLAGAVTKT   +  E EE +  AP +I+ RE+LE+   +NYFY+P LG VPEIDVP+ LPDLPG+ +D+ +  D G  IAPS P  IP+LPT   +V       L D   T PPPPPPP          PP PP+  AP            + +                    +G P +V D      GRA L+ +IR AGG   AKL++ KERK  K++++E+    +   GG LMSDLF+KL MRRKGIS
Sbjct:   13 QTYAVPLIQPDLRREEAVQQMADALQYLQKVSGDIFSRISQQVEQSRSQVQAIGEKVSLAQAKIEKIKGSKKAIKVFSSAKYPAPERLQEYGSIFTGAQDPGLQRRPRHRIQSKHRPLDERALQEKDFPVCVSTKPEPEDDAE---EGLGGLPSNISSVSSLLLFNTTENLGKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVPENYFYVPDLGQVPEIDVPSYLPDLPGITNDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSAS-----------------PSVQGAPREVVD---PSGGRATLLESIRQAGGIGKAKLRSMKERKLEKKQQKEQEQVRATSQGGHLMSDLFNKLVMRRKGIS 422
The following BLAST results are available for this feature:
BLAST of TCONS_00017364-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WASH35.834e-9144.11Putative WAS protein family homolog 3 OS=Homo sapi... [more]
back to top