TCONS_00017742-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00017742-protein
Unique Name	TCONS_00017742-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	316

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00017742-protein ID=TCONS_00017742-protein|Name=TCONS_00017742-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
MTNQKFYAVYYFIFRFALVPSNLLLSSILKNNDRKVNYHTNSTLQMNLQC
GIKACPTLTSPLSHVNIKDVHRLFWIYLEVGLSGVPIILLFFSNIKEQKD
NQEEDVWVVVKDNLVAVLKIFREMYILELFIISIALGMVHSFMIGDMTKN
FAACAFGIEYIGYVIMCSGLGNCLAALTVYTLIEKIGFFIIIITSWACAS
TIMISFFFWNVASSPPAVLLVINILFAMAEGALASQIHGYYGVIFFERKA
AAFATYSIARCIGDTISFAYGNSVCMVTKVVILLLVNFVGICLFCHVYFD
NQRLKKKKMIQALQPS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_009937	XLOC_009937	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00017742	TCONS_00017742	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020846	MFS_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 113..309 e-value: 1.7E-8 score: 33.5
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 17..293

Blast

[Close]

BLAST of TCONS_00017742-protein vs. Swiss-Prot (Human)
Match: UN93A (Protein unc-93 homolog A OS=Homo sapiens GN=UNC93A PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.981e-23
Identity = 73/290 (25.17%), Postives = 141/290 (48.62%), Query Frame = 0

Query:    1 MTNQKFYAVYYFIFRFALVPSNLLLSSILKNNDRKVNYHTNSTLQMNLQCGIKAC---PTLTSPLSHVNIKDVHRLFWIYLEVGLSGVPIILLFFSNIKE-QKDNQEEDVWVVVKDNLVAVLKIFREMYILELFIISIALGMVHSFMIGDMTKNFAACAFGIEYIGYVIMCSGLGNCLAALTVYTLIEKIGFFIIIITSWACASTIMISFFFWNVASSPPAVLLVINILFAMAEGALASQIHGYYGVIFFERKAAAFATYSIARCIGDTISFAYGNSVCMVTKVVILLLV 286
            M NQ ++ +++ IF+ + V  NL+ S +      +    T    Q+   CG   C    T T+     + + V+ L  IY   G+  V +I  F   I++ Q++++ E   V     L++  K++R+  +  L ++ +  G+   F+  + T+++  C  GI+++GYV++C    + L ++    + +  G  ++ +       + MI+   W   +   AV  V + L+ +A+    +Q +  YGV+F + K AAFA Y +   +G  I+F Y   +C+  K+ ILL V
Sbjct:  133 MVNQ-YFGIFFLIFQSSGVWGNLISSLVFGQTPSQ---ETLPEEQLT-SCGASDCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRESEGEKKSVPFWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFSATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRADHLAVFFVFSGLWGVADAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGV 417

The following BLAST results are available for this feature:

BLAST of TCONS_00017742-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00017742-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
UN93A	1.981e-23	25.17	Protein unc-93 homolog A OS=Homo sapiens GN=UNC93A...	[more]

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TCONS_00017742-protein (polypeptide) - C. hemisphaerica