TCONS_00018744-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018744-protein
Unique NameTCONS_00018744-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length182

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018744-protein ID=TCONS_00018744-protein|Name=TCONS_00018744-protein|organism=Clytia hemisphaerica|type=polypeptide|length=182bp
EAHDNPVARFFICCCRCCLWCLENCLRFLNKNAYIMIAIYGKSYCSSAKE
AFSLLLRNPARAIAINGITEFILFIGKLLVTGAIGVASFFWFVQFNALQP
DKLKYTIVPILICTLGAYIVATLFFSVYDMGIDTMFLSFLEDMERNNGSE
EKPYFMTKSLRNIMNLRNEVELKKKKDYSQVE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010491XLOC_010491Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018744TCONS_00018744Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007603Choline_transptr-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 156..176
IPR007603Choline transporter-likePFAMPF04515Choline_transpocoord: 4..144
e-value: 2.9E-50
score: 171.2

Blast
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BLAST of TCONS_00018744-protein vs. Swiss-Prot (Human)
Match: CTL5 (Choline transporter-like protein 5 OS=Homo sapiens GN=SLC44A5 PE=2 SV=4)

HSP 1 Score: 183.726 bits (465), Expect = 1.104e-54
Identity = 87/176 (49.43%), Postives = 124/176 (70.45%), Query Frame = 0 
Query:    4 DNPVARFFICCCRCCLWCLENCLRFLNKNAYIMIAIYGKSYCSSAKEAFSLLLRNPARAIAINGITEFILFIGKLLVTGAIGVASFFWFVQ---FNALQPDKLKYTIVPILICTLGAYIVATLFFSVYDMGIDTMFLSFLEDMERNNGSEEKPYFMTKSLRNIMNLRNEVELKKKK 176
             N +++F  CC RCC WCLEN ++FLN+NAYIMIAIYG+++C SAK+AF+LL+RN  +    + +T F+LF+GKLLV G+IGV +F +F Q     A  P  L Y  VP+L    G+Y++A  FFSVY M ++T+F+ FLED+ERN+GS  +PYF+T +L  I+  +  V  K+K+
Sbjct:  544 QNTLSKFLQCCLRCCFWCLENAIKFLNRNAYIMIAIYGRNFCRSAKDAFNLLMRNVLKVAVTDEVTYFVLFLGKLLVAGSIGVLAFLFFTQRLPVIAQGPASLNYYWVPLLTVIFGSYLIAHGFFSVYAMCVETIFICFLEDLERNDGSTARPYFVTPNLHGILIKKQLVPQKQKE 719
The following BLAST results are available for this feature:
BLAST of TCONS_00018744-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTL51.104e-5449.43Choline transporter-like protein 5 OS=Homo sapiens... [more]
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