TCONS_00018792-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018792-protein
Unique NameTCONS_00018792-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length159

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018792-protein ID=TCONS_00018792-protein|Name=TCONS_00018792-protein|organism=Clytia hemisphaerica|type=polypeptide|length=159bp
MAQVGKRLAQKAVDWTRLGQNIPAAATAQFNAFRNRHETIKGSLSKTQPK
PTPINWEHYSSVVKNKALVEKMQAGYQKVSVPYPEDVESASIAAKEKAIE
AEIAQTSKITKDTVAKLQQEIAKIQAQKPYEEMTTDEYMEANPDLKREAD
REISEIGWR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010523XLOC_010523Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018792TCONS_00018792Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008689ATP_synth_F0_dsu_mt
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078hydrogen ion transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0000276mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..127
NoneNo IPR availablePFAMPF05873Mt_ATP-synt_Dcoord: 5..147
e-value: 6.4E-37
score: 126.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..159
NoneNo IPR availablePRODOMPD968187coord: 26..158
e-value: 4.0E-7
score: 126.0
IPR008689ATP synthase, F0 complex, subunit D, mitochondrialPIRSFPIRSF005514Mitoh_ATP-synt_Dcoord: 3..159
e-value: 4.3E-42
score: 141.6
IPR008689ATP synthase, F0 complex, subunit D, mitochondrialSUPERFAMILY161065ATP synthase D chain-likecoord: 7..125

Blast
[Close]
BLAST of TCONS_00018792-protein vs. Swiss-Prot (Human)
Match: ATP5H (ATP synthase subunit d, mitochondrial OS=Homo sapiens GN=ATP5H PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 1.796e-17
Identity = 39/144 (27.08%), Postives = 77/144 (53.47%), Query Frame = 0 
Query:    5 GKRLAQKAVDWTRLGQNIPAAATAQFNAFRNRHETIKGSLSKTQPKPTPINWEHYSSVVKNKALVEKMQAGYQKVSVPYPEDVESASIAAKEKAIEAEIAQTSKITKDTVAKLQQEIAKIQAQKPYEEMTTDEYMEANPDLKRE 148
            G++LA K +DW    + IP    A  ++ ++ +ET+   L+     P  I+W +Y + V    LV+  +  +  + VP PED  +A + A+EK      A+   ++K  + + ++E+ K++   P+++MT ++  EA P+ K +
Sbjct:    3 GRKLALKTIDWVAFAEIIPQNQKAIASSLKSWNETLTSRLAALPENPPAIDWAYYKANVAKAGLVDDFEKKFNALKVPVPEDKYTAQVDAEEKEDVKSCAEWVSLSKARIVEYEKEMEKMKNLIPFDQMTIEDLNEAFPETKLD 146
The following BLAST results are available for this feature:
BLAST of TCONS_00018792-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATP5H1.796e-1727.08ATP synthase subunit d, mitochondrial OS=Homo sapi... [more]
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