TCONS_00018855-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018855-protein
Unique NameTCONS_00018855-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length341

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018855-protein ID=TCONS_00018855-protein|Name=TCONS_00018855-protein|organism=Clytia hemisphaerica|type=polypeptide|length=341bp
MKKKEKCCNAFDFCRIPIIISIYVIFLVIGAIIITRIEAEGDKRLRNQKR
QQLLNVYKKYNISLNDQRIREFLRAAYGALEVDAMKLNKMTQELESRWDF
TSSLFFTATLVTTIGYGDRYPMTGGGRSFCIIYALIGIPFTGYLVTILCT
LFANLIKRTESAIKKIRKIKRIENKNSFKRVDEEDEIKTRTEVYQMVRAI
QVGIATSIFLIFIWLLPSLIIMISNDWNFETAIYFCFITISTIGLGDVTP
SMTIDPLQLEDEKNKLGSSVKQISIICYIIISLTSITVIISLATSIWKTK
KLKKKWRKEAKSFREIQGHENDAFSNVTQVTVVENARSVDG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010555XLOC_010555Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018855TCONS_00018855Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0032802pore_dom_K_chnl
IPR013099K_chnl_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005267potassium channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0071805potassium ion transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071805 potassium ion transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0005267 potassium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003280Two pore domain potassium channelPRINTSPR013332POREKCHANELcoord: 109..137
score: 51.76
coord: 241..250
score: 61.3
NoneNo IPR availableGENE3D1.10.287.70coord: 180..308
e-value: 3.0E-16
score: 58.4
NoneNo IPR availableGENE3D1.10.287.70coord: 13..163
e-value: 1.1E-23
score: 82.3
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 14..42
coord: 95..179
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 197..307
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 210..294
e-value: 1.3E-12
score: 47.4
coord: 94..152
e-value: 8.6E-17
score: 60.8

Blast
[Close]
BLAST of TCONS_00018855-protein vs. Swiss-Prot (Human)
Match: KCNK1 (Potassium channel subfamily K member 1 OS=Homo sapiens GN=KCNK1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.755e-34
Identity = 85/304 (27.96%), Postives = 156/304 (51.32%), Query Frame = 0 
Query:   29 IGAIIITRIEAEGDKRLRNQKRQQLLNVYKKYNISLNDQRIREFLRAAYGALEVDAMKLNKMTQELESRWDFTSSLFFTATLVTTIGYGDRYPMTGGGRSFCIIYALIGIPFTGYLVTILCTLFANLIKRTESAIKKIRKIKRIENKNSFKRVDEEDEIKTRTEVYQMVRAIQVGIATSIFLIFIWLLPSLII-MISNDWNFETAIYFCFITISTIGLGDVTPSMTIDPLQLEDEKNKLGSSVKQISIICYIIISLTSITVIISLATSIWKTKKLKKK-WRKEAKSFREIQ--GHENDAFSNVT 328
             GA++ + +E   +  LR + R+ L   + + +  L++Q++ +FL     A       L+  +      WDFTS+LFF +T+++T GYG   P++ GG++FCIIY++IGIPFT   +T        +++R    + + R +     +  F +           +V  +V A+ +G  T     FI   P+ +  ++ +DWNF  + YFCFI++STIGLGD  P          +  N+    + +I I CY+++ L ++ V++     + + KK +K  + K+ K   ++    H+  +FS++T
Sbjct:   36 FGAVVFSSVELPYEDLLRQELRK-LKRRFLEEHECLSEQQLEQFLGRVLEASNYGVSVLSNASGNW--NWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLT-------AVVQRITVHVTR-RPVLYFHIRWGFSK-----------QVVAIVHAVLLGFVTVSCFFFI---PAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPG---------EGYNQKFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKDKDEDQVHIIEHDQLSFSSIT 305
The following BLAST results are available for this feature:
BLAST of TCONS_00018855-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCNK11.755e-3427.96Potassium channel subfamily K member 1 OS=Homo sap... [more]
back to top