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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00018922-protein ID=TCONS_00018922-protein|Name=TCONS_00018922-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1781bp
MSSVNVILRARPFSKSEIEDGAEIILSMEKQKTYLNYVRDDSSESLGLGK
RDSFSQKQFLFDRSFWSVNKEDEHFVDQQQIFLEYGKNVVQSAIEGYNAC
VFAYGQTGSGKSYTMMGTEDNIGLIPRICQGLFKELLKMREDVTSRLEVS
YMEIYNEQCRDLLKKKSKADAPQALKVREHPKEGPFVQDLSIHPVTDYTS
ISAIIEEGNRLRVTAGTKMNSTSSRSHSIFMMKLTQAKFCGNIPSETVSK
INLVDLAGSERISKSGASGIRLKEGGNINKSLTTLGLVISALAENSSRKS
SEGKIPRKTSFVPYRDSILTWLLKDSIGGNSKTIMIATVSPASHHYGETL
STLRYASRARKIVNKPIINEDPNVKTIRELRSEIEKLRKQLHLNKGQDQS
GLVSQKVEAKLKENEEKVDKLTKHWLNKITEGQQIFKEKCMSLSQQGQQT
VLTSSKPHLVGLEVDPLSTDIVIYHLEEGKTIIGSSDLSDEQGIALEGSG
IEQEHCDLHVTSERVILHPIAGATYINSQLAVQDWELRQGDILQFGHFWK
FRFHNPMEAAMLREKRRSGRMNSLPDNSTSGRVSPAVMHHYRSLDSGLSS
PDDFEQDFGYDHCTTRRILNVGGNELVLNSTIASQNDSSIQRSSPPRDLS
LQVPCRAERVKERPKSTNSDLVILRSSRDTRLEKREKISPKNNLETRTSR
RQMLKSASASDILDKPKHEEANASVAVNLNDSDRNELYLSADQLTPRTSR
SRSRNEHKREMKTSPSPLHRSPMLSPFGKSRNSSASDLSLSTDDLAFNFL
LQSQMRNSSSSSSIDGKAPKKLSFPNYADDKTQSAWDLSPRKFEQETTGD
IVQAESLSVLNRRSFNFEEFFVHADNSNSGSALAQEALDAADILKEKKEQ
LKLLIESYREAEISRVEIERENMRRARENEAIFTKQQHHLEDLLQQQKEK
LREARADLGDFQKVLSVEKQHQRVNVENEVDNLMRLKQEHRACYDWSEHE
LRKKKFKLKVKIEEYWKRMDLYETLLLELELERNKVKQEVDEKLQERIKE
YETQQQNELNEIREQIAVTKHDIETYTLQLEEEKERLSVTADELGSTEQD
YDRKISDSERFALDVKQQEKEMLSSCKDDITRVDKKMDQIKEKLHHYTIY
KMHECSQDGGDCCHNDSTQEDSLDCNLTEDKQRSALDDLYQEKQELETTY
DKKVEKYKIMLQNAQDALADLRQDKITALEECRNKIADRKSVVVRLEQQI
SEETDHHLSLKNELKAHERPRSFISACPEESEEDVIANEQQIEQLLQSKD
KVRKILEATLREEFNELKATRAQDGDDAPPVETESSSAVDKAVNLVFHAG
NSSTYIESLIKKNNQYEQRRRVLGNIRTELQDLMKYQMTLHREVAENFLT
QKSLFEEVRSQERKDIHDTIQTLILDSADNDDELLSHIFKESERIIEHQR
RLDELENQMYQKITENYDLQERLDAINEKLSTALDTFSIENTMLSSENPE
LSSEYDSLNAEKVKCENLINELQERLFDERKDYLELLRSKDGYDVIGQEY
RDERHTLFQTEGNKAAADALREVFMGENLMEALKKTGFEHSYKTTCGGWS
YLGQQKDVWLFKKRSDTPQIISMMGRGIIKTSAKRVWETVRNPLSRLIYD
KLIKKINIVEDFSEQLKVVYMQHQTRLLFVKQKKDCCCVHNERSERNKFI
ATHTSIEHPDCPERKNYSRLKVLPSGWIVEPYTEHGEDWSLVWYLIQIDV
GKSYLPSFFIDSIAQKLPLSILSLRDYLILS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003777 | microtubule motor activity |
| GO:0008017 | microtubule binding |
| GO:0008289 | lipid binding |
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007018 | microtubule-based movement |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007018 |
microtubule-based movement |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0008289 |
lipid binding |
| molecular_function |
GO:0008017 |
microtubule binding |
| molecular_function |
GO:0003777 |
microtubule motor activity |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 937..964 |
| None | No IPR available | COILS | Coil | Coil | coord: 1505..1525 |
| None | No IPR available | COILS | Coil | Coil | coord: 884..921 |
| None | No IPR available | COILS | Coil | Coil | coord: 1066..1093 |
| None | No IPR available | COILS | Coil | Coil | coord: 1179..1263 |
| None | No IPR available | COILS | Coil | Coil | coord: 404..424 |
| None | No IPR available | COILS | Coil | Coil | coord: 969..989 |
| None | No IPR available | COILS | Coil | Coil | coord: 1438..1472 |
| None | No IPR available | COILS | Coil | Coil | coord: 377..397 |
| None | No IPR available | COILS | Coil | Coil | coord: 1292..1323 |
| None | No IPR available | COILS | Coil | Coil | coord: 1019..1061 |
| None | No IPR available | GENE3D | 1.20.1170.10 | | coord: 778..1148
e-value: 0.14
score: 10.5 |
| None | No IPR available | GENE3D | 1.20.5.340 | | coord: 1427..1553
e-value: 5.2E-4
score: 19.3 |
| None | No IPR available | GENE3D | 2.60.200.20 | | coord: 447..562
e-value: 9.5E-21
score: 73.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 657..718 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1317..1337 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 737..785 |
| None | No IPR available | CDD | cd00060 | FHA | coord: 462..553
e-value: 3.19236E-4
score: 40.0622 |
| None | No IPR available | SUPERFAMILY | 55961 | Bet v1-like | coord: 1592..1775 |
| IPR001752 | Kinesin motor domain | PRINTS | PR00380 | KINESINHEAVY | coord: 217..234
score: 54.35
coord: 96..117
score: 72.42
coord: 250..268
score: 62.54
coord: 312..333
score: 62.39 |
| IPR001752 | Kinesin motor domain | SMART | SM00129 | kinesin_4 | coord: 1..370
e-value: 2.6E-154
score: 528.6 |
| IPR001752 | Kinesin motor domain | GENE3D | 3.40.850.10 | | coord: 1..376
e-value: 1.2E-127
score: 424.9 |
| IPR001752 | Kinesin motor domain | PFAM | PF00225 | Kinesin | coord: 9..362
e-value: 5.7E-108
score: 360.7 |
| IPR001752 | Kinesin motor domain | PROSITE | PS50067 | KINESIN_MOTOR_2 | coord: 3..362
score: 112.027 |
| IPR023393 | START-like domain | GENE3D | 3.30.530.20 | | coord: 1554..1778
e-value: 7.6E-30
score: 103.5 |
| IPR019821 | Kinesin motor domain, conserved site | PROSITE | PS00411 | KINESIN_MOTOR_1 | coord: 249..260 |
| IPR002913 | START domain | PROSITE | PS50848 | START | coord: 1637..1762
score: 15.954 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 3..395 |
| IPR008984 | SMAD/FHA domain | SUPERFAMILY | 49879 | SMAD/FHA domain | coord: 457..554 |
Blast
BLAST of TCONS_00018922-protein vs. Swiss-Prot (Human)
Match: KI16B (Kinesin-like protein KIF16B OS=Homo sapiens GN=KIF16B PE=1 SV=2) HSP 1 Score: 564.688 bits (1454), Expect = 1.720e-174 Identity = 295/574 (51.39%), Postives = 387/574 (67.42%), Query Frame = 0
Query: 1 MSSVNVILRARPFSKSEIEDGAEIILSMEKQKTYLNYVRDDSSESLGLGKRDSFSQKQFLFDRSFWSVNKEDEHFVDQQQIFLEYGKNVVQSAIEGYNACVFAYGQTGSGKSYTMMGTEDNIGLIPRICQGLFKELLKMR--EDVTSRLEVSYMEIYNEQCRDLLKKKSKADAPQALKVREHPKEGPFVQDLSIHPVTDYTSISAIIEEGNRLRVTAGTKMNSTSSRSHSIFMMKLTQAKFCGNIPSETVSKINLVDLAGSERISKSGASGIRLKEGGNINKSLTTLGLVISALAENSSRKSSEGKIPRKTSFVPYRDSILTWLLKDSIGGNSKTIMIATVSPASHHYGETLSTLRYASRARKIVNKPIINEDPNVKTIRELRSEIEKLRKQLHLNKGQDQSGLV----SQKVEAKLKENEEKVDKLTKHWLNKITEGQQIFKEKCMSLSQQGQQTVLTSSKPHLVGLEVDPLSTDIVIYHLEEGKTIIGSSDLSDEQGIALEGSGIEQEHCDLHVTSERVILHPIAGA-TYINSQLAVQDWELRQGDILQFGHFWKFRFHNPMEAAMLREKRR 567
M+SV V +R RP ++ E + A+ I+ MEK KT + ++ G G K F +D SF+S + + +V Q+ +F G +VV+SA EGYNACVFAYGQTGSGKSYTMMG + GLIPRIC+GLF + + ++ + R EVSY+EIYNE+ RDLL++KS L+VREHPKEGP+V+DLS H V +Y + +++ GN R TA T MN SSRSH+IF +K TQAKF +P ETVSKI+LVDLAGSER +GA+G+RLKEGGNINKSL TLG VISALA + S+ ++ +K FVPYRDS+LTWLLKDS+GGNSKTIMIAT+SPA +YGETLSTLRYA+RA+ I+NKP INED NVK IRELR+EI +L+ L +Q L+ + +E KL++NE +V +LTK W NK E Q I KE+ ++L ++G VL S PHL+G++ D LST I++YHL+EG+T +G D S EQ I L G +E EHC V L P++G+ +N V+ L QG ++ G FRF++P EAA LREKR+
Sbjct: 1 MASVKVAVRVRPMNRREKDLEAKFIIQMEKSKTTITNLKIPEG---GTGDSGRERTKTFTYDFSFYSADTKSPDYVSQEMVFKTLGTDVVKSAFEGYNACVFAYGQTGSGKSYTMMGNSGDSGLIPRICEGLFSRINETTRWDEASFRTEVSYLEIYNERVRDLLRRKSSKTF--NLRVREHPKEGPYVEDLSKHLVQNYGDVEELMDAGNINRTTAATGMNDVSSRSHAIFTIKFTQAKFDSEMPCETVSKIHLVDLAGSERADATGATGVRLKEGGNINKSLVTLGNVISALA-DLSQDAANTLAKKKQVFVPYRDSVLTWLLKDSLGGNSKTIMIATISPADVNYGETLSTLRYANRAKNIINKPTINEDANVKLIRELRAEIARLKTLLAQG---NQIALLDSPTALSMEEKLQQNEARVQELTKEWTNKWNETQNILKEQTLALRKEGIGVVLDSELPHLIGIDDDLLSTGIILYHLKEGQTYVGRDDASTEQDIVLHGLDLESEHCIFENIGGTVTLIPLSGSQCSVNGVQIVEATHLNQGAVILLGRTNMFRFNHPKEAAKLREKRK 565
The following BLAST results are available for this feature:
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