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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00018963-protein ID=TCONS_00018963-protein|Name=TCONS_00018963-protein|organism=Clytia hemisphaerica|type=polypeptide|length=680bp
MTSPRTFKDIRELCYCESPPSFVTLQQDALGCDDIELTADTILELKDKVM
TGDGDIAGLNCRVDDQNDNDGRTITLPMHFVGSFTETFSYQQLHKRYIVA
DLIKEFKLPINVQFLSNTEKNSSYGPHLGLLTLERKRAMNSILATTIIDN
VRHALTFSAELPVTIQVATGIKKSPYRYPNSQSQVDLKKFDYCSPSDPYS
GVTLQTFDDLHTPMIPRRGSTPRMYNRTRSSTDASSRYSSTTSVPELPKK
TQSTSTIVKNRNKSLDLGKNFENFFKFKGLRKSMSSKIGKDKNGRNKQKS
QDELDETRSFIQSDDGHSTTDLLSIAPTSNGSDSIGNESFSRITECMEAM
TMSIDQTMTPGRRRRHSRKGSGDSGICLSGRKHPRSRSLSRSRSRMSPDA
PSSNPSDTIDTFSEWSLPMNLKDSPSSGRKTYSSQGGSSSSYLWGVDSNL
ISTEQENQPATDDYQTDFLTNQNTINMMNFHNTEKDKSNEVENNKTTNQD
LSPLTSRQLESINEIRQLNEDGVCRVLETLNFYDFKDIFTQNQINGELLL
DLEIDDLVNDLKLSLFQAKKIVKYIKGWRPQSEDRQITEASRRNSLNPRD
WSENDVLLHMTTINLIDFGNFCIKNQVNGDLLLDILDKETLNSLKNDHKV
KISNLESKKLLNFVVKGWRPDVSPKKSALL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 638..658 |
| None | No IPR available | GENE3D | 1.10.150.50 | | coord: 587..666
e-value: 1.6E-4
score: 21.2
coord: 505..586
e-value: 2.8E-11
score: 42.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 354..439 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 213..258 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 286..338 |
| IPR001660 | Sterile alpha motif domain | SMART | SM00454 | SAM_4 | coord: 598..671
e-value: 70.0
score: 0.3
coord: 515..581
e-value: 0.0049
score: 26.1 |
| IPR001660 | Sterile alpha motif domain | PFAM | PF07647 | SAM_2 | coord: 522..575
e-value: 2.0E-5
score: 24.5 |
| IPR025946 | CABIT domain | PFAM | PF12736 | CABIT | coord: 42..169
e-value: 2.8E-12
score: 46.4 |
| IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 513..579 |
Blast
The following BLAST results are available for this feature:
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