TCONS_00019518-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00019518-protein
Unique Name	TCONS_00019518-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	540

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00019518-protein ID=TCONS_00019518-protein|Name=TCONS_00019518-protein|organism=Clytia hemisphaerica|type=polypeptide|length=540bp
MATVEEVNDVIIIGAGWSGLLSCKYALEEKLSVRVLEKREDIGGVWKFSD
DPNVTTVMRNSTTSSSSTVTEISDFPMPESIGEFPKHWDINQYLNDFADV
HKLRRYIHFNTTVKRMYKINEIWNIETENHKEYRGKNVIVCSGVHQKANT
DLETGLLKNFTGDLRHSGNLKEFAEEHRGRRLMIIGGGETASDIMDEWYP
NVDSIIWCIPRGQHFFRKYAKLLPNRKPQALDKASSRALKLVSPHTRSKP
GLAWICRWTTNGSITAYQGHGIPEFRNEAPFFHSFINKHAHALDYIDYEK
VIPKGPIECVTGNHVIFKDGSSVDVDVIIQCTGYEVSFPFLPKTQQLKPT
ELYKFVFNPEDPTLSFVGFVRPIVGSIPGIAEMNARWVCRTISGRVPMAC
KIERHRAIYEDQKFWLEYFDKTSHRIGTLVEGYTYLDDIAKLSQCYPDYW
SLFKRNPTAAITAYFAPYNGCSYRLNEPQQEELALETLKRHSKDTMNFWN
PFFILFLRLILFDWFCDILGAVKYRIQTNPRWQTVREWRX

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_010971	XLOC_010971	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00019518	TCONS_00019518	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000960	Flavin_mOase
IPR020946	Flavin_mOase-like
IPR023753	FAD/NAD-binding_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004499	N,N-dimethylaniline monooxygenase activity
GO:0050660	flavin adenine dinucleotide binding
GO:0050661	NADP binding
GO:0016491	oxidoreductase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0004499	N,N-dimethylaniline monooxygenase activity
molecular_function	GO:0016491	oxidoreductase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000960	Flavin monooxygenase FMO	PRINTS	PR00370	FMOXYGENASE	coord: 32..56 score: 31.4 coord: 107..119 score: 43.85 coord: 379..392 score: 32.5 coord: 8..24 score: 55.0 coord: 318..345 score: 35.71
IPR020946	Flavin monooxygenase-like	PFAM	PF00743	FMO-like	coord: 10..484 e-value: 3.1E-55 score: 187.5
None	No IPR available	PIRSF	PIRSF000332	FMO	coord: 6..496 e-value: 1.9E-59 score: 199.2
IPR023753	FAD/NAD(P)-binding domain	GENE3D	3.50.50.60		coord: 4..539 e-value: 7.9E-52 score: 175.8
IPR023753	FAD/NAD(P)-binding domain	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 311..457
IPR023753	FAD/NAD(P)-binding domain	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 9..201

Blast

[Close]

BLAST of TCONS_00019518-protein vs. Swiss-Prot (Human)
Match: FMO2 (Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Homo sapiens GN=FMO2 PE=1 SV=4)

HSP 1 Score: 159.844 bits (403), Expect = 3.456e-43
Identity = 140/480 (29.17%), Postives = 225/480 (46.88%), Query Frame = 0

Query:   10 VIIIGAGWSGLLSCKYALEEKLSVRVLEKREDIGGVWKFSD--DPNVTTVMRNSTTSSSSTVTEISDFPMPESIGEFPKHWDINQYLNDFADVHKLRRYIHFNTTVKRMYKINEI-----WNIETE-NHKEYRG--KNVIVCSGVHQKANTDLET-GLLKNFTGDLRHSGNLKEFAEEHRGRRLMIIGGGETASDIMDEWYPNVDSIIWCIPRGQHFFRKYAKLLPNRKP--QALDKASSRALKLVSPHTRSKPGLAWICRWTTNGSITAYQGHGIPEFRNEAPFFHSFINKHAHALDYIDYEKVIPKGPIECVTGNHVIFKDGS-SVDVDVIIQCTGYEVSFPFLPKTQ---QLKPTELYKFVF--NPEDPTLSFVGFVRPIVGSIPGIAEMNARWVCRTISGRVPMACKIERHRAIYEDQKFWLEYFDKTSHRIGTLVEGYT-YLDDIAKLSQCYPDYWSLFKRNPTAAITAYFAPYN 469
            V +IGAG SGL+S K  ++E L     E+ EDIGGVW+F +  +    ++ ++  T++S  ++  SDFPMPE    F  +  + +Y   FA    L +YI F TTV  + K  +      W + T+ N KE       V+VCSG H   +  L++   ++ F G   HS   K   +   G+R+++IG G + SDI  E   N   +      G     + ++   +  P            L+ V P T  K    W+     N     ++ +G+ E +N+       +N    +       KV  K  ++ +T    IF+DG+   ++DVII  TGY  SFPFL  +    +     LYK++F  + +  TL+ +G ++P+ GSI   AE+ ARWV R   G   +  +      I +  +  ++ F ++  +  TL   Y  YLD++A      PD+ SL  ++P  A+  YF P N
Sbjct:    5 VAVIGAGVSGLISLKCCVDEGLEPTCFERTEDIGGVWRFKENVEDGRASIYQSVVTNTSKEMSCFSDFPMPEDFPNFLHNSKLLEYFRIFAKKFDLLKYIQFQTTVLSVRKCPDFSSSGQWKVVTQSNGKEQSAVFDAVMVCSGHHILPHIPLKSFPGMERFKGQYFHSRQYKH-PDGFEGKRILVIGMGNSGSDIAVELSKNAAQVFISTRHGTWVMSRISE---DGYPWDSVFHTRFRSMLRNVLPRTAVK----WMIEQQMNRWFN-HENYGL-EPQNKYIMKEPVLNDDVPSRLLCGAIKV--KSTVKELTETSAIFEDGTVEENIDVIIFATGYSFSFPFLEDSLVKVENNMVSLYKYIFPAHLDKSTLACIGLIQPL-GSIFPTAELQARWVTRVFKGLCSLPSERTMMMDIIKRNEKRIDLFGESQSQ--TLQTNYVDYLDELALEIGAKPDFCSLLFKDPKLAVRLYFGPCN 469

The following BLAST results are available for this feature:

BLAST of TCONS_00019518-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00019518-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FMO2	3.456e-43	29.17	Dimethylaniline monooxygenase [N-oxide-forming] 2 ...	[more]

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TCONS_00019518-protein (polypeptide) - C. hemisphaerica