TCONS_00019578-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00019578-protein
Unique Name	TCONS_00019578-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	622

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00019578-protein ID=TCONS_00019578-protein|Name=TCONS_00019578-protein|organism=Clytia hemisphaerica|type=polypeptide|length=622bp
MDLHKILIFLVISLSLQIILAEDDDDFVRNGFSVGLTGDSMPEITTNVKS
NRYSLEKGPVAQYLSSMLDEKRKKQASRKRRAATIDPIASSKRMYHLEVF
VVADNTIYRRFDNDSQKLTDHIHEIFHMVDTMYRPLNFRVTVVGIEIWSD
HDQIEFSFTEEPYMNLIRFNSYVQNRSENYMMADHVHLITGKGLFKGGNI
GLSHFATVCSPDHATAFTVNLIAPTNFTATVVAHEIGHDLGILHDRPGCQ
CNEPIENNTCIMSTASKGFEPLPRLFTDCSYNDMVQYYLSTYKPTCLFNV
PTVTTDVTSACGNNILDAGEECDCGHPYFCTNPCCNPNTCKLTAGSQCYE
GGCCHECKIASKGTCCRTMLDSTCDLPDVCDGSSHVCKDTYKEDRTPCEQ
GGMCYKGHCQSHASQCQMIWGADTTENGHSECYNLNKRGDWYGHCGSSPG
DYSACADQDVKCGKPYCANTPQDYPVVGWRKGVDVLTVKYNDQHTHRCHV
PRITFGRNQTNETMVLDGTPCGTNKMCQNQKCIELSTFQSKCSGCLDYIG
SCTNDGVCRCHTGVTSDKCEQIHSDCMAVNNNNNNNDNNGNGNDGRQLQP
MTVFSLTMFWMTAIELLYTMIS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011007	XLOC_011007	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00019578	TCONS_00019578	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001762	Disintegrin_dom
IPR006586	ADAM_Cys-rich
IPR024079	MetalloPept_cat_dom
IPR001590	Peptidase_M12B
IPR018358	Disintegrin_CS
IPR034027	Reprolysin_adamalysin

Vocabulary: **Molecular Function**
Term	Definition
GO:0008237	metallopeptidase activity
GO:0004222	metalloendopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001762	Disintegrin domain	SMART	SM00050	DISIN_2	coord: 317..392 e-value: 5.4E-24 score: 95.7
IPR001762	Disintegrin domain	GENE3D	4.10.70.10		coord: 321..391 e-value: 6.4E-18 score: 64.8
IPR001762	Disintegrin domain	PFAM	PF00200	Disintegrin	coord: 317..389 e-value: 4.9E-16 score: 59.2
IPR001762	Disintegrin domain	PROSITE	PS50214	DISINTEGRIN_2	coord: 308..394 score: 17.247
IPR001762	Disintegrin domain	SUPERFAMILY	57552	Blood coagulation inhibitor (disintegrin)	coord: 317..389
IPR006586	ADAM, cysteine-rich	SMART	SM00608	acr	coord: 393..535 e-value: 1.1E-25 score: 101.3
IPR006586	ADAM, cysteine-rich	PFAM	PF08516	ADAM_CR	coord: 394..503 e-value: 9.7E-20 score: 71.1
IPR024079	Metallopeptidase, catalytic domain	GENE3D	3.40.390.10		coord: 90..320 e-value: 4.7E-44 score: 150.2
IPR001590	Peptidase M12B, ADAM/reprolysin	PFAM	PF01421	Reprolysin	coord: 97..301 e-value: 5.4E-42 score: 143.9
IPR001590	Peptidase M12B, ADAM/reprolysin	PROSITE	PS50215	ADAM_MEPRO	coord: 95..301 score: 33.976
IPR018358	Disintegrin, conserved site	PROSITE	PS00427	DISINTEGRIN_1	coord: 348..367
IPR034027	Reprolysin domain, adamalysin-type	CDD	cd04269	ZnMc_adamalysin_II_like	coord: 97..299 e-value: 3.07745E-49 score: 169.718
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 94..301

Blast

[Close]

BLAST of TCONS_00019578-protein vs. Swiss-Prot (Human)
Match: ADAM7 (Disintegrin and metalloproteinase domain-containing protein 7 OS=Homo sapiens GN=ADAM7 PE=1 SV=3)

HSP 1 Score: 258.07 bits (658), Expect = 2.973e-76
Identity = 156/445 (35.06%), Postives = 239/445 (53.71%), Query Frame = 0

Query:   96 HLEVFVVADNTIYRRFDNDSQKLTDHIHEIFHMVDTMYRPLNFRVTVVGIEIWSDHDQIEFSFTEEPYMNLIRFNSYVQNRSENYMMADHVHLITGKGLFKGGNIGLSHFATVCSPDHATAFTVNLIAPTNFTATVVAHEIGHDLGILHDRPGCQCNEPIENNTCIMSTASKGFEPLPRL-FTDCSYNDMVQYYLSTYKPTCLFNVP-TVTTDVTSACGNNILDAGEECDCGHPYFCTNPCCNPNTCKLTAGSQCYEGGCCHECKIASKGTCCRTMLDSTCDLPDVCDGSSHVC-KDTYKEDRTPCEQG-GMCYKGHCQSHASQCQMIWGADTTENGHSECYNLNKRGDWYGHCGSSPGDYSACADQDVKCGKPYCANTPQDYPVVGWRKGVDVLTVKYNDQHTHRCHVPRITFGRNQTNETMVLDGTPCGTNKMCQNQKCIELS 536
            ++E+F+VAD+T+YRR  +   KL + I  + + V+ +Y+ LN  VT+VGIEIW+  D+IE     E    L+RF+ + +   +     DHV L++GK L+     G+S+   +C P ++T+   +L+  TN  A  +AH++GH+LG+ HD   C C     +  C+M +       +P L F+ CS N   QY L  YKPTC+ N+P          CGN  LD GEECDCG    CTNPCC+ +TC L  G  C EG CC  C+I   G+ CR   D  CD P++C G S  C KD ++ +  PC+   G C+ G C +   QC  ++  +  E+ H  CY +N +G+ +G+C +    +  C ++DV+CGK YC    +   ++G  K   +   + N   T +C    I    + T+  +V  GT CG   +C N +C+ + 
Sbjct:  200 YVELFIVADDTVYRRNGHPHNKLRNRIWGMVNFVNMIYKTLNIHVTLVGIEIWTHEDKIELYSNIE--TTLLRFSFWQEKILKTRKDFDHVVLLSGKWLYSHVQ-GISYPGGMCLPYYSTSIIKDLLPDTNIIANRMAHQLGHNLGMQHDEFPCTC----PSGKCVMDSDGS----IPALKFSKCSQNQYHQY-LKDYKPTCMLNIPFPYNFHDFQFCGNKKLDEGEECDCGPAQECTNPCCDAHTCVLKPGFTCAEGECCESCQIKKAGSICRPAKDE-CDFPEMCTGHSPACPKDQFRVNGFPCKNSEGYCFMGKCPTREDQCSELFDDEAIES-HDICYKMNTKGNKFGYCKNKENRFLPCEEKDVRCGKIYCTGG-ELSSLLGEDKTYHLKDPQKNA--TVKCKT--IFLYHDSTDIGLVASGTKCGEGMVCNNGECLNME 625

The following BLAST results are available for this feature:

BLAST of TCONS_00019578-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00019578-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ADAM7	2.973e-76	35.06	Disintegrin and metalloproteinase domain-containin...	[more]

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TCONS_00019578-protein (polypeptide) - C. hemisphaerica