TCONS_00020029-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020029-protein
Unique NameTCONS_00020029-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length630

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020029-protein ID=TCONS_00020029-protein|Name=TCONS_00020029-protein|organism=Clytia hemisphaerica|type=polypeptide|length=630bp
MSHSDCSDSEPEDLEQSVSISKGKLVVKMDQTIKKSESSATSTKEEVPIK
DCPVKNVTVFVDRAEVNRIVDLNLQQGNVEVLLKDLPDCMDQDSMRVSCF
GEATIVEVAYQEKAVKENGDDCDDSEQIKSKTEAEKKNIKGSIKTLEANK
AKHEQRIEVINKEKLLLQNYADCISSKKEDKVGDVLEKKSIENMLNFLAI
YEERSSRIQNEFSDLTQKIEEIVKEIGILKQNLVKLEPKTQKTNMQRNVS
ILLEVKEESNVNLVASYVVSRASWRPFYDVRAFNKDSSVQILYFGMIRQN
TGEDWEDAKLSLSTALPSVGGSPPSLKPQLLKVATVLTAKSAKSFRKSKH
IKGFGNRNLQLESLAFAEPALYACALNDSTIEDSTIEDSYSAMPYSLAPS
AMPTAQATENLTSTNFDILRPSTIESDDVEHKVSICQLDFSPEFEYLAIP
KSVAHAFLKIKVKNDSNYALLAGDANVFLDNNFLTKTTLSAVSPMEEFDI
ALGVDPSVKVTYKPVKKFQQRTGMISKADLFNFHQVIEIKNTKSLPVKIK
VTDQCPWSTNDKIKITLQDPDIKFPKGNSSDTSIIKNGNASLYTNNNTIE
WELEVPSSETKTINLKYQVEHPIGVRIEGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011259XLOC_011259Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020029TCONS_00020029Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025554DUF4140
IPR011935CHP02231
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..225
NoneNo IPR availableCOILSCoilCoilcoord: 129..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
IPR025554Domain of unknown function DUF4140PFAMPF13600DUF4140coord: 57..164
e-value: 2.9E-18
score: 66.0
IPR011935Conserved hypothetical protein CHP02231PFAMPF13598DUF4139coord: 265..622
e-value: 1.7E-54
score: 184.6
IPR011935Conserved hypothetical protein CHP02231TIGRFAMTIGR02231TIGR02231coord: 390..626
e-value: 1.1E-57
score: 193.9
coord: 54..386
e-value: 2.0E-56
score: 189.7

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020029-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top