TCONS_00020075-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020075-protein
Unique NameTCONS_00020075-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length458

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020075-protein ID=TCONS_00020075-protein|Name=TCONS_00020075-protein|organism=Clytia hemisphaerica|type=polypeptide|length=458bp
MRKAAWSLVSYHQRSFQICSSLQSQVVQQDIAIEKSEHGPEGTYKSLLEN
GLLKVDEEQQRVVYRLQKLYQDVRTYNKTSASNLFGKLFSFSSQSSNAPR
GVYLYGSVGCGKTMLMDMLYKNVDIRPKKRVHFNQFMIDVHKRIHQFKLD
APPVDHRSRTSKPLDPIPPIAKDISDETWFLCFDEFQVTDVADAMILKRL
FTCLFENGVIVIATSNRHPQDLYKNGLQRGNFLPFIPILERYCEIVPLSG
VDYRRLEFSDISKTYFNSQDASTKDKLEDVFKLLCENEKQDVKPKTVEVY
GRNNVFQRACGKVAFTNFDELCRKALGAADYIAFAKTFDTIILTDVPVMS
PRRKVELRRFITLIDNFYDNKVRLILSAAQPLDNLFITNETMNDYDAEAK
RMLMDDLGLIGTQDEDHNISLFTAEEEIFAIERTVSRLTEMQSEQYWQAS
EDESNNQN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011282XLOC_011282Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020075TCONS_00020075Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005654ATPase_AFG1-like
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005654ATPase, AFG1-likePFAMPF03969AFG1_ATPasecoord: 43..402
e-value: 3.4E-101
score: 338.7
NoneNo IPR availableGENE3D3.40.50.300coord: 55..453
e-value: 9.6E-14
score: 50.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 88..248

Blast
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BLAST of TCONS_00020075-protein vs. Swiss-Prot (Human)
Match: AFG1L (AFG1-like ATPase OS=Homo sapiens GN=AFG1L PE=1 SV=2)

HSP 1 Score: 419.468 bits (1077), Expect = 1.233e-143
Identity = 212/411 (51.58%), Postives = 283/411 (68.86%), Query Frame = 0 
Query:   38 HGPEGTYKSLLENGLLKVDEEQQRVVYRLQKLYQDVRTYNKTSASNLFGKLFSFSSQSSNAPRGVYLYGSVGCGKTMLMDMLYKNVDIRPKKRVHFNQFMIDVHKRIHQFKLDAPPVDHRSRTSKPLDPIPPIAKDISDETWFLCFDEFQVTDVADAMILKRLFTCLFENGVIVIATSNRHPQDLYKNGLQRGNFLPFIPILERYCEIVPL-SGVDYRRLEFSDISKTYFNSQDASTKDKLEDVFKLLCENEKQDVKPKTVEVYGRNNVFQRACGKVAFTNFDELCRKALGAADYIAFAKTFDTIILTDVPVMSPRRKVELRRFITLIDNFYDNKVRLILSAAQPLDNLFITNETMNDYDAEAKRMLMDDLGLIGTQDEDHNISLFTAEEEIFAIERTVSRLTEMQSEQYW 447
            HGP   Y  L++   LK DE Q+RV+  LQKL++D++ YN   A  LF KLFS     S  PRG+Y+YG VG GKTM+MDM Y  V+++ KKRVHF+ FM+DVHKRIH+ K  + P       +K  DPI PIA++IS+E   LCFDEFQVTD+ADAMILK+LF  LF+NGV+V+ATSNR P+DLYKNGLQR NF+PFI +L+ YC  V L SG+DYR+ E     K Y+ + +A  +  ++ +F  L + +    +P+ ++V GR     +ACG VA   F+ELC + LGA+DY+  +K FDTI L ++P  +   + + RRFITLIDNFYD KVR+I SA+ P+ +LF+     +D + E  R+LMDDLGL  +QD    +S+FT EEEIFA +RT+SRLTEMQ+EQYW
Sbjct:   73 HGPLDHYDFLIKAHELKDDEHQRRVIQCLQKLHEDLKGYN-IEAEGLFSKLFS----RSKPPRGLYVYGDVGTGKTMVMDMFYAYVEMKRKKRVHFHGFMLDVHKRIHRLK-QSLPKRKPGFMAKSYDPIAPIAEEISEEACLLCFDEFQVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKEYCNTVQLDSGIDYRKRELPAAGKLYYLTSEADVEAVMDKLFDELAQKQNDLTRPRILKVQGRELRLNKACGTVADCTFEELCERPLGASDYLELSKNFDTIFLRNIPQFTLANRTQGRRFITLIDNFYDLKVRIICSASTPISSLFLHQH--HDSELEQSRILMDDLGL--SQDSAEGLSMFTGEEEIFAFQRTISRLTEMQTEQYW 473
The following BLAST results are available for this feature:
BLAST of TCONS_00020075-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AFG1L1.233e-14351.58AFG1-like ATPase OS=Homo sapiens GN=AFG1L PE=1 SV=... [more]
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