Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00020096-protein ID=TCONS_00020096-protein|Name=TCONS_00020096-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2058bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00020096-protein vs. Swiss-Prot (Human)
Match: MD12L (Mediator of RNA polymerase II transcription subunit 12-like protein OS=Homo sapiens GN=MED12L PE=1 SV=2) HSP 1 Score: 703.36 bits (1814), Expect = 0.000e+0 Identity = 537/1809 (29.68%), Postives = 881/1809 (48.70%), Query Frame = 0 Query: 2 ATTLMDVHSRPLKRQKLGIPDLYPQSQKQEEDDLSEANVKRGFNYKPA-VNNEYGTARDTAFSIHLSKYVNQFNKILYQKQKVNTLQD-NKKKVQVNVKETFWHVTGKSKGQVTKWMQDLASNKPLSQLGKKIPFFNKKEEIPTCLASNNVSLYRATWFLKMINAAYQSSIAESKTKKRQSFDSHSEWTNTFLKFMREQLLKLSEYYGRPYTSLNQRSPM--EIENATSYWNYAVQLTECLMRQILLDKHEFLAQIIDLIDKQKFNHDEALLKHVLPLVLQHLDSILQSQILSRSLANNAIKKLNALNASAESMQKEEAENDLKLNTERSF-------------PLQPMFTEFKECQQHASLVTILSGIVQAITLRCPAALIWSITKVNASSNDPNKNQVLGSPLDKLPCPPSELIIGSNEDEADKNDSEEIMNALKEKEMEIRQRSIAVENRW---LCPENQSTKKADENYFLLDFLDQMDFTKCDGKFKSDVIYDLIFKDKNVSDYDEQVAIDKQSILLLCQWATSRKRHGQHRAIVCADVIKKRNKYLLELQSGESMTEEEVEMTSNYP--------FQQLLFQFLDEAAPTPESIDVNQDA---QFQSLIIFFGELINSNTFSHDQYLCTLIARNDLSSSVLKKLDFMFPSTDDGAGGNVSSSSGSTSSNKKAKGKSNNKKESTGKTSSDHDYQSGEFASEFILGGDDNALPLFSMDFTENSSSSHPSEEDADTAKKEHRAGV----------HLFYVLHFPHPSINKDSHDNNQRMVLLFGFGGRRQEFLKKLKEIKNELSQCFNGVFTTANGKEED---LKKNSGKMKEKINAVLIKFTALPVYERHNLSTKFLHQMIGKKHTTIDRYGACSELPTASSLYLLYELLSLSFNIQGIITLTESLLVQQDNMEPKI---ANTKTDVHIPSKLYLVSAAIRNNLQSFLMDPELISSIFQGLLQAAQ----SSNCSSGQRCALVLLHSMYNTSPVLSERFEKRFASFSLKIESGILSSHKPSNTNLLWEQQFLKEHFEKPGNFPLEFIWESKLTNERPAEIYSFVCNALLAVCKTT-NQQRLYALSSFCCEVASHFSNMCTEFLGIINAFCSSLTTSGLGYEQTTQSVNLKEKSTVQALAFFTSVLVARQIIKLNDLLSEVLYPALKVTS---KKSTKGLQLVCRILEQIFVLNPFPAPKLKL-----GQTHPFALDVFDAGLLRGEMNKANLSSVLSVLKRLYL--QAEKGNSSVDRQKTEDRDNLFSTLFNADSGDSFDSAYSKGKSDNKSPS---NSISDVIKRSLQLIINQSWLQDKVLSN-ENKNTIMKAVLDSELKSHQSRHFISLILNQETKSSPAVNVSNIQ-QITNRICMTLDKWSLHNASLELQLLLKMASKE-------EHQSILTAIGRSILSTLTETSDV-----------------------------------GHRRS--LVGPLISKLSISIQGRILKSASETLEKGKWWIPGGNNKLSAD----------SQSILFALISSCLQNQEENKNMFLGSLQKQLQALVTAQKEDKI--DLFSSQFSGLVDAVRLRLNLVGMLFDNLLKSPSVLGDWAITLFSLLLSGIIPYTENTVLFTNVTDMVVILLQKIHMNEIAQMSQQQASGQLQTQPLPNNEILRFNLVVRKMRKELSQRPSTEIGTLCEELLPLLTGPCEIICSEPTYSLETLQNINKEKPNKPESSNQPEQIRKRTHVQSINAWDLLEDSKNSGPLNLAMFGAVRVEKRPLRYVEESLRLIHHSHQKRKPLSYFL 1687 A L+ RPLKR +LG PD+YPQ KQ+ED+L+ NVK+GFN +PA +E+G+AR+ I+ SK F+ IL +K K+NT QD KKK QVN K+ +W VT +S+ + W DLA NKPLS L KK+P +KKE++ LA +V + RATW +KM AY S+I+E+K KKRQ+ D + EWT +++REQL K+S++Y ++ + P+ E+E A W Y +L + ++ +L+KHE+L I+D+++K + D+ L + L+LQ+ D +QS LSR LA ++L+ L + + ++ + + + S P+Q F++F C QH LV LS ++Q +TL CP+AL+W N S+N+ NK+ GSPLD L PS L + + +++ + E E +I+QR AVE RW C E+ + L+ LD+ F + D + +Y IF D E D+ + LLC+WA S KR G+HRA+ A +++KR + + GES +E E S+ FQ +L +FLD AP+ D N + +F +L++ F E I + FSHD Y+CTLI+R DLS T+S + N E K DHD + F+ +P S + S S K+E + HL Y HFP P SH+ NQR +LL+G G R E +LK+I ++ + N TT G ++ +KN + + V K L +++H ++++ + ++ + T G LP A + L+++L+ + NI G+I LL + +E ++ +++ + + A +R +++P+ + +F+GL + S CSS +RC L L+ +Y + L +F F+S K++ I ++ P+N+NL W+ F+ + E P + + K+ ++ A YSFVCN L+ VC + R+ +++F E+ + + + +E+LG++ A C S + G+ +V++ + S +LA F ++L+ARQ L D++ V P+L + + G ++ CR+L L+ F AP+ G+ P D LL N + +V +VLK + + A+ GN+SV K +D L + D +A KS KS S ++ + + L+ I Q W+ + L E T + +LD L + Q++ + LI N+Q Q RI L++W+L + LELQL++K K+ E ++L I ++ + +++D+ RR LV PLI++L S+QGR+LK+A E LEKG+ G ++K D SQ +L+ +CL+ Q+E + L SLQ Q+ +++ +E++ D+ + Q + +A++LRLNLVG +FD + +S DWA+ L ++ SG + N LFT V DM+ +L+ ++++ S + N+ NL V+K++KEL + S I + +LLPL C++I EP + +L + K +S ++ + ++ T Q ++ WDL E KN PL+ A FG VRV++R ++Y E+ L++H+H KP SY+L Sbjct: 3 AFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGSARNIV--INPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFSDLAGNKPLSILAKKVPILSKKEDVFAYLAKYSVPMVRATWLIKM-TCAYYSAISEAKIKKRQAPDPNLEWTQISTRYLREQLAKISDFYHMASSTGDGPVPVPPEVEQAMKQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPMDDDLLKLLLP-LMLQYSDEFVQSAYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMMIGPNNSSIGAPSPGPPGPGMSPVQLAFSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVW-----NYSTNE-NKSANPGSPLDLLQVAPSSLPMPGGNTAFN----QQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLDRHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMAVAKLLEKRQAEIEAERCGESEVLDEKESISSSSLAGSSLPVFQNVLLRFLDTQAPSLS--DPNSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLS---------------------------VTASTRPRSPVGENADEHYSK---DHDVKMEIFS----------PMPGESCENANTSLGRRMSVNCEKLVKREKPRELIFPSNYDLLRHLQYATHFPIPLDESSSHECNQRTILLYGVGKERDEARHQLKKITKDILKILNKKSTTETGVGDEGQKARKNKQETFPTLETVFTKLQLLSYFDQHQVTSQISNNVL--EQITSFASGTSYHLPLAHHIQLIFDLMEPALNINGLIDFAIQLLNELSVVEAELLLKSSSLAGSYTTGLCVCIVAVLRRYHSCLILNPDQTAQVFEGLCGVVKHVVNPSECSSPERCILAYLYDLYVSCSHLRSKFGDLFSSACSKVKQTIYNNVMPANSNLRWDPDFMMDFIENPSARSINYSMLGKILSDNAANRYSFVCNTLMNVCMGHQDAGRINDIANFSSELTACCTVLSSEWLGVLKALCCS-SNHVWGFNDVLCTVDVSDLSFHDSLATFIAILIARQCFSLEDVVQHVALPSLLAAACGDADAEPGARMTCRLL-----LHLFRAPQACFLPQATGKPFPGIRSSCDRHLLAAAHNSIEVGAVFAVLKAIMMLGDAKIGNNSVSSLKNDDFT--MRGLRCDGNADDIWTASQNPKSCGKSISIETANLREYARYVLRTICQQEWVGEHCLKEPERLCTDKELILDPVLSNMQAQKLLQLICYPHGIKE-CTEGDNLQRQHIKRILQNLEQWTLRQSWLELQLMIKQCLKDPGSGSVAEMNNLLDNIAKATIEVFQQSADLNNSSNSGMSLFNPNSIGSADTSSTRQNGIKTFLSSSERRGVWLVAPLIARLPTSVQGRVLKAAGEELEKGQHL--GSSSKKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLQNQVNQILSNWREERYQDDIKARQM--MHEALQLRLNLVGGMFDTVQRSTQWTTDWALLLLQIITSGTVDMHTNNELFTTVLDMLGVLINGTLASDLSNASPGGSE---------ENKRAYMNL-VKKLKKELGDKRSESIDKV-RQLLPLPKQTCDVITCEP---MGSLIDTKGNKIAGFDSIDKKQGLQVSTK-QKVSPWDLFEGQKNPAPLSWAWFGTVRVDRRVIKYEEQHHLLLYHTHPMPKPRSYYL 1725 The following BLAST results are available for this feature:
BLAST of TCONS_00020096-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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