TCONS_00020556-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00020556-protein
Unique Name	TCONS_00020556-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1226

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00020556-protein ID=TCONS_00020556-protein|Name=TCONS_00020556-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1226bp
MASSYRRNILSISKPDQHAFGMSRAREYQTDEPQSSSSGAGEGMSIFHHE
AKRIQQKQKSHEGDRFLQMFRRSKRDKERRRGSSFNTNDSSDESGSISSQ
TGSLKRASKLFGFGKKDKRKSLDNGKESPELPNHHDSNGLHVETNHHHGK
QGQFSPVQENFPSVSPHHITPLTSNYINGRGTRLDIFVPSTPEMIAEKSR
TISESSSLGFEFGTDGSSLNFQDFAADVLKATEEKLKGVDLKLPDLKSPD
KEDTSRIVYIDRAQSTGDFGFTIRRSTIDNGSKIVHTIEPTGPDTYGLLP
GDRVVEVNDENVENFRRDNIIEKIAKSGITVKLKVVPVPELAEFSARTAA
LQAHTPTLGKVNFSSAGSLRTKILTKKVLALPKETGDESEKQWTGADKVW
LVHKSGFSSGALSKTSNENHDGDKDDENDEGGVDIKLDHGGEVIQKIDES
SLEKVNHPKFDNAENLTSLTYLNESGCLHTLRQRYGGNLVHTYAGNNLIV
IKPKHPLSAYTKQVMDMFRGCKQEDMPPHIFAMAQTSYRSMLASHVNQSI
ILQGNAGSGKSFNAKQLLGYLTSVTVSEHNTSIGAKLSAAQSIVESFISA
RTKLSRNATFAYNLYSLNFDVYGLVIGASIENYMFDKNRLTRVLPGESTF
RIFYELLDSGDMPLLQELGLDLLKKEESIFFDFDQQFSTFERHQEKWIQL
QHDLETLNISQHEIKGIISLLAAILLLNQAGVTVSPNAKPYFKNIEFAQK
ASTILGCKIEEIARIVFATPLQNRNSMRRSRSGSILSRSSSVSSQSSINR
LKSEEKLSKTDENSSPKTNKNTDPSISSQILVDNVYDVCVHALEGLLIGL
YIEAFTSITRLVNRSLQTVSRTTTTMNILDGPGFQNKTILGLPGSYEDLT
KNYCREKIQWFMHYCSFTATLDRYNRETVGVSYEVDASCAPSFTVQVLDK
LTVDRRNESADAKGIFWIIEEEALRPNSNELILVEKIKTQHITNKGSSLV
SVVPELPEVFTVSHLQNTVKVAYNVSGWLRKVREHPAIKMAYSLLTESSK
THISDLYAGHQSGAFQNESNTQARFVGRKRSQSILISVKKNAAVMTVKAQ
TERLLEQLDRTTVHFVHCFLPDTRAGLIDPNEVSDSQEAGNNFSFDIPYV
RKQFKSSYLLENMRLHRLGYPEHIGYPDFRRRFDILLAKEDRLAEPVLDE
KKVVSDMVKKLEIDERKYKLGLSQVF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011538	XLOC_011538	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00020556	TCONS_00020556	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001609	Myosin_head_motor_dom
IPR001478	PDZ
IPR027417	P-loop_NTPase

Vocabulary: **Cellular Component**
Term	Definition
GO:0016459	myosin complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003774	motor activity
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016459	myosin complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003774	motor activity
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001609	Myosin head, motor domain	PRINTS	PR00193	MYOSINHEAVY	coord: 491..510 score: 34.96 coord: 547..572 score: 39.62 coord: 592..619 score: 23.09
IPR001609	Myosin head, motor domain	SMART	SM00242	MYSc_2a	coord: 455..1226 e-value: 1.2E-27 score: -30.4
IPR001609	Myosin head, motor domain	PFAM	PF00063	Myosin_head	coord: 464..1226 e-value: 2.2E-91 score: 307.0
IPR001609	Myosin head, motor domain	PROSITE	PS51456	MYOSIN_MOTOR	coord: 461..1226 score: 86.579
IPR001478	PDZ domain	SMART	SM00228	pdz_new	coord: 267..339 e-value: 1.4E-8 score: 44.5
IPR001478	PDZ domain	PFAM	PF00595	PDZ	coord: 263..335 e-value: 1.5E-8 score: 34.7
IPR001478	PDZ domain	PROSITE	PS50106	PDZ	coord: 257..339 score: 12.305
IPR001478	PDZ domain	SUPERFAMILY	50156	PDZ domain-like	coord: 259..340
None	No IPR available	GENE3D	2.30.42.10		coord: 245..357 e-value: 1.9E-11 score: 43.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 778..824
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 411..436
None	No IPR available	CDD	cd00992	PDZ_signaling	coord: 256..336 e-value: 4.24721E-13 score: 65.6658
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 439..786 coord: 839..1226

Blast

[Close]

BLAST of TCONS_00020556-protein vs. Swiss-Prot (Human)
Match: MY18A (Unconventional myosin-XVIIIa OS=Homo sapiens GN=MYO18A PE=1 SV=3)

HSP 1 Score: 501.901 bits (1291), Expect = 1.691e-151
Identity = 351/1019 (34.45%), Postives = 544/1019 (53.39%), Query Frame = 0

Query:  266 TGDFGFTIRRST-IDNG------SKIVHTIEP---TGPDTYGLLPGDRVVEVNDENVENFRRDNIIEKIAKSGITVKLKVVPVPELAEFSA---RTAALQAHTPTLGKVNFSSAGSLRTKILTKKVLALPKETGDESEKQWTGADKVWLVHKSGFSSGALSKTSNENHDGDKDDENDEGGVDIKLDHGGEVIQKIDESSLEKVNHPKFDNAENLTSLTYLNESGCLHTLRQRYGGNLVHTYAGNNLIVIKPKHPLSAYTKQVMDMFRGCKQEDMPPHIFAMAQTSYRSMLASHVNQSIILQGNAGSGKSFNAKQLLGYLTSVT-VSEHNTSIGAKLSAAQSIVESFISARTKLSRNATFAYNLYSLNFDVYGLVIGASIENYMFDKNRLTRVLPGESTFRIFYELLDSGDMPLLQELGLDLLKKEESIFFDFDQQFSTFERHQ--EKWIQLQHDLETLNISQHEIKGIISLLAAILLLNQAGVT--VSPNAKPYFKNIEFAQKASTILGCKIEEIARIVFATPLQNRNSMRRSRSGSILSRSSSVSSQSSINRLKSEEKLSKTDENSSPKTNKNTDPSISSQILVDNVYDVCVHALEGLLIGLYIEAFTSITRLVNRSLQTVSRTTTTMNILDGPGFQNKTILGLP--GSYEDLTKNYCREKIQWFMHYCSFTATLDRYNRETVGVSYEVDASCAPSFTVQVLDKLT----VDRRNESADAKGIFWIIEEEALRPNSNELILVEKIKT----QHITNKGSSLVSVVPELPEVFTVSHLQNTVKVAYNVSGWLRKVREHPAIKMAYSLLTESSKTHISDLYAGHQSGAFQNESNTQARFVG------------RKRSQSILISVKKNAAVMTVKAQTERLLEQLDRTTVHFVHCFLPDTRAGLIDPNEV---------------SDSQEAGNNFSFDIPYVRKQFKSSYLLENMRLHRLGYPEHIGYPDFRRRFDIL---LAKEDRLAEPVLDEKKVVSDMVKKLEIDERKYKLGLSQVF 1226
            TGDFGF++RR+T +D G       ++VH  EP   T     GL+PGDR+VE+N  NVE+  RD I+E I +SG +V+LKV P+PEL+E S    R+       P+  K              T++ +A        +E+ W   +KVWLVH+ GFS  +  K+   N          EG V +KLDH G ++  +DE  +EK N P  D  E+L SL YLNES  LHTLRQRYG +L+HTYAG +L+V+ P+   + Y+++VM MF+GC++EDM PHI+A+AQT+YR+ML S  +QSIIL G++GSGK+ + + L+ YL ++  +S +      K  A  +++E+F ++ T ++ NAT    + SL+FD  G V  ASI+  + +K R+ R    E+TF +FY LL  GD  L  EL L+ L   E+  F         E+ +  +++ +LQ  ++ L IS  E K    +LAAI  L  AG T   +   +  F   E+AQKA+ +LGC +EE++  +F          +    G  L RS+S        R   EE                T P +S+           +  LEG+  GLY E FT +  LVNR+L++   +  +M I+D PGFQN    G     S+E+L  NY ++++Q   H  +F   L+RY  E + ++++ D       +V  +D+ +    V     + +A+G+ W++EEEAL P ++E  L+E++ +    Q    KG S + +    P  F + H   T  V YNV+GWL   +++PA + A  LL +S K  IS+L+ G ++G+    S + A   G            RK   + + +VKK +  + +K Q + L++ + ++ +HFVHCFLP       +P                   D  EAG     D+P +R Q + S LL+ MR++R GYP+H+ + +FRRRFD+L   L K+      V+DE++ V ++++ L++++    +GLS+VF
Sbjct:  228 TGDFGFSLRRTTMLDRGPEGQACRRVVHFAEPGAGTKDLALGLVPGDRLVEINGHNVESKSRDEIVEMIRQSGDSVRLKVQPIPELSELSRSWLRSGEGPRREPSDAK--------------TEEQIA--------AEEAWNETEKVWLVHRDGFSLASQLKSEELNLP--------EGKVRVKLDHDGAILD-VDEDDVEKANAPSCDRLEDLASLVYLNESSVLHTLRQRYGASLLHTYAGPSLLVLGPRGAPAVYSEKVMHMFKGCRREDMAPHIYAVAQTAYRAMLMSRQDQSIILLGSSGSGKTTSCQHLVQYLATIAGISGNKVFSVEKWQALYTLLEAFGNSPTIINGNATRFSQILSLDFDQAGQVASASIQTMLLEKLRVARRPASEATFNVFYYLLACGDGTLRTELHLNHLA--ENNVFGIVPLAKPEEKQKAAQQFSKLQAAMKVLGISPDEQKACWFILAAIYHLGAAGATKEAAEAGRKQFARHEWAQKAAYLLGCSLEELSSAIF----------KHQHKGGTLQRSTSF-------RQGPEE----------SGLGDGTGPKLSA-----------LECLEGMAAGLYSELFTLLVSLVNRALKSSQHSLCSMMIVDTPGFQNPEQGGSARGASFEELCHNYTQDRLQRLFHERTFVQELERYKEENIELAFD-DLEPPTDDSVAAVDQASHQSLVRSLARTDEARGLLWLLEEEALVPGASEDTLLERLFSYYGPQEGDKKGQSPL-LHSSKPHHFLLGHSHGTNWVEYNVTGWLNYTKQNPATQNAPRLLQDSQKKIISNLFLG-RAGSATVLSGSIAGLEGGSQLALRRATSMRKTFTTGMAAVKKKSLCIQMKLQVDALIDTIKKSKLHFVHCFLPVAEGWAGEPRSASSRRVSSSSELDLPSGDHCEAG-LLQLDVPLLRTQLRGSRLLDAMRMYRQGYPDHMVFSEFRRRFDVLAPHLTKKHGRNYIVVDERRAVEELLECLDLEKSSCCMGLSRVF 1171

The following BLAST results are available for this feature:

BLAST of TCONS_00020556-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00020556-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MY18A	1.691e-151	34.45	Unconventional myosin-XVIIIa OS=Homo sapiens GN=MY...	[more]

You are here

TCONS_00020556-protein (polypeptide) - C. hemisphaerica