TCONS_00020575-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00020575-protein
Unique Name	TCONS_00020575-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	475

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00020575-protein ID=TCONS_00020575-protein|Name=TCONS_00020575-protein|organism=Clytia hemisphaerica|type=polypeptide|length=475bp
MVEKYMKIFSCVVFLYTLCQNAFAKTDSNNVMPSDVLVIIRNMHFERSIL
KAQKIKDSIMQAANALDKTGMEVLMMHEDWFQYGSWTILPIINRIHKKYG
SSKKWIYFCEDTTQVDLKGLLKVLGRFQEGKNWFLGHGLHDSEPSIIHHF
AFHNDLKSFKFPDFDAGWALSMPLVNELKERLESNPPDYGFSIDVKHEVA
KFIYNDGKGTRLTNVPQFCINSALKKDHCVSTVAKEIPDCGLVDENEIFI
AVKTCKKFHDERVPVVKKTVGKHAKHIRYYSDVADESIPTEYIDVGNTER
GHCQKLHNIIKRSTDEEWRDKEWLVVIDDDTIMSYDRLRRHLACYESKKP
VLLGERYAYALNFRKAGYEYPTGGGGMIMNRAAINELIKSGCKCYKADEP
DDMWLGNCFNRMQIPMVHSNSLHQARPSQYTKEFLSHRFLVSFHKHHMVD
PMQVYQDYLQAGGEDPNVQSEKEEL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011548	XLOC_011548	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00020575	TCONS_00020575	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029044	Nucleotide-diphossugar_trans
IPR003378	Fringe-like

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0016757	transferase activity, transferring glycosyl groups

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10		coord: 243..439 e-value: 5.6E-5 score: 22.2
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 272..423
IPR003378	Fringe-like	PFAM	PF02434	Fringe	coord: 245..447 e-value: 4.2E-49 score: 167.2

Blast

[Close]

BLAST of TCONS_00020575-protein vs. Swiss-Prot (Human)
Match: B3GLT (Beta-1,3-glucosyltransferase OS=Homo sapiens GN=B3GLCT PE=1 SV=2)

HSP 1 Score: 385.571 bits (989), Expect = 7.182e-130
Identity = 195/446 (43.72%), Postives = 281/446 (63.00%), Query Frame = 0

Query:   29 NNVMPSDVLVIIRNMHFERSILKAQKIKDSIMQAANALDKTGMEVLMMHEDWFQYGSWTILPIINRIHKKYGSSKKWIYFCEDTTQVDLKGLLKVLGRFQEGKNWFLGHGLHDSEPSIIHHFAFHNDLKSFKFPDFDAGWALSMPLVNELKERLESNPPDYGFSIDVKHEVAKFIYNDGKGTRLTNVPQFCINSALKKDHCVSTVAKEIPDC-GLVDENEIFIAVKTCKKFHDERVPVVKKTVGKHAKHIRYYSDVADESIPTEYIDVGNTERGHCQKLHNIIKRSTDEEWRDKEWLVVIDDDTIMSYDRLRRHLACYESKKPVLLGERYAYALNFRKAGYEYPTGGGGMIMNRAAINELIKSGCKCYKADEPDDMWLGNCFNRMQIPMVHSNSLHQARPSQYTKEFLSHRFLVSFHKHHMVDPMQVYQDYLQAGGEDPNVQSEKE 473
            N++    ++ +I++        +A+++K SI++ A  L +    VL++H+   Q G+WTILP++      Y  +  WI+FCE+ T++ +  LL+ L R+   K WFLG  LHD E +IIHH+AF  +   FK+PDF AGWALS+PLVN+L +RL+S      F+ID+KHE+A +I++ G G  LT VP+FC N      +C +T    +P C   V + +IF+AVKTCKKFH +R+P+VK+T    A  I YYSD  + SIPT  + + NT+RGHC K   I++R  +       WLV++DDDT++S  RL+  L+CY+S +PV LGERY Y L     GY Y TGGGGM+ +R A+  L+ S C+CY  D PDDM LG CF+ + IP+ HS   HQARP  Y K++LSH+  +SFHKH  +DP++VY  +L    ED   Q  ++
Sbjct:   51 NDIDLKGIVFVIQSQSNSFHAKRAEQLKKSILKQAADLTQELPSVLLLHQLAKQEGAWTILPLLPHFSVTYSRNSSWIFFCEEETRIQIPKLLETLRRYDPSKEWFLGKALHDEEATIIHHYAFSENPTVFKYPDFAAGWALSIPLVNKLTKRLKSESLKSDFTIDLKHEIALYIWDKGGGPPLTPVPEFCTNDV--DFYCATTFHSFLPLCRKPVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEYYSDYTENSIPTVDLGIPNTDRGHCGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGEPVFLGERYGYGLG--TGGYSYITGGGGMVFSREAVRRLLASKCRCYSNDAPDDMVLGMCFSGLGIPVTHSPLFHQARPVDYPKDYLSHQVPISFHKHWNIDPVKVYFTWLAPSDEDKARQETQK 492

The following BLAST results are available for this feature:

BLAST of TCONS_00020575-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00020575-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
B3GLT	7.182e-130	43.72	Beta-1,3-glucosyltransferase OS=Homo sapiens GN=B3...	[more]

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TCONS_00020575-protein (polypeptide) - C. hemisphaerica