TCONS_00020989-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020989-protein
Unique NameTCONS_00020989-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1182

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020989-protein ID=TCONS_00020989-protein|Name=TCONS_00020989-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1182bp
MKSNGTAPGEQGKRFLSTSIPTSPIRRNTTPPPTDGDNSTGIIIGATIGG
IILFILIVILFVFYTKRKRRHLNRSQSQGQHSNDFTDLHINGSIESGQHN
PGLDASVQEIYKGPEKALEAAVIDDTLPETEKEETSKNLIHNISIKLLTT
WSDIYTMIDSDQYIRMKQHVEDSMETVYSPYKGFESATLLKFREGSVIAD
IQLRFDAGVIEPLLVLEKAIRAGRCADLEVDKNYFCIITPNLETIDGFSK
KRMIEKQRIESGYYEGTDFDEHHPNKLSLKQRNGHSTKSTESKESMTSEM
GSSYVSSTNISIYSGAEEEGHDITIHSGHKKKTGLLPHFTKHYGSRKMDG
GGSSLKGKSNNGLQMGVPHIALFDFQPQDYRELKLTRGELVEVTSVDSGG
WAKAVNKEKKFGWVPQNFISPIEPKKYQEIKMKTEAIHTLAGLDVALGAD
EEEECYHVPHSIPKPLHHKSDSDCSEEISQLFITIYPFEPNQIETESTSN
ELKLEVGDLIDVLKTNETGWWKGRCLRTEDEGWFPSSYVKPYMPEVIEEE
KSIALSDTEVIRRAAESSILKTKPIDGYSSDNGEVRTKMLRENSTTSKDV
EDSNNAEAAPDITAKKESVILRPKKGSPKERAVSLYIDTEMPTTKIQSPA
PLTPPPRLSNHRDHGTEKAFAVPPSKPVPPPPRQKHIEKEYSHLVASGRL
GSQDSLKTVSTECLASLGGRSPRKRGSDRRRNSEEISKTNIDDVVRRYQD
PAKLNRIRPKSFQAPETPKSSFLSLVTKMHQQSSIKSALSLPSLVGDQMK
LSPDDDRPFLDPIPRKAKSRSFVGSNATIGLFSERNCSSMKDLSQAGTIE
SNWLQRHHLKQSSLTDISRDSMRSASATSLSSSTNDLNVMKKPLPPEPNE
SEADELRSSLTSKSFQGMGLSHHGLGPNSMMSQLLRPPLISQKPVAPPRS
SSKNNNAKKLIEEQRSRQGGSGLLSEHYSRAPFVYGRLRQHISFESINEE
SEQASTPKDETVKLPGDHDHRRSRSEPHERILQNEARSFTLSGRKLTETE
ISSPVSEQPESDKTLRPMSIEDSDSRIQVACDELGVRTLTYDSRVSSLQS
LTSVGSSIRSTVSSKHEQQNLRRAIMNVHGQGAYDLSYKVGAIVYECRPK
NKNGLCYGILDDSTEGWYPAESVEPFYMDQQL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011772XLOC_011772Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020989TCONS_00020989Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 500..515
score: 28.94
coord: 517..526
score: 37.35
coord: 367..377
score: 30.07
coord: 530..542
score: 39.84
IPR001452SH3 domainSMARTSM00326SH3_2coord: 1120..1177
e-value: 2.3
score: 5.4
coord: 367..423
e-value: 1.0E-11
score: 54.9
coord: 480..543
e-value: 1.6E-17
score: 74.2
IPR001452SH3 domainPFAMPF00018SH3_1coord: 485..536
e-value: 1.4E-11
score: 43.7
coord: 370..415
e-value: 2.1E-10
score: 40.0
IPR001452SH3 domainPROSITEPS50002SH3coord: 370..424
score: 12.549
IPR001452SH3 domainPROSITEPS50002SH3coord: 477..544
score: 15.955
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 367..434
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 481..542
NoneNo IPR availableGENE3D2.30.30.40coord: 1049..1181
e-value: 0.0023
score: 17.2
NoneNo IPR availableGENE3D1.20.5.100coord: 30..71
e-value: 7.0E-10
score: 37.9
NoneNo IPR availableGENE3D2.30.30.40coord: 512..764
e-value: 6.2E-13
score: 47.7
NoneNo IPR availableGENE3D2.30.30.40coord: 421..511
e-value: 3.2E-12
score: 45.6
NoneNo IPR availableGENE3D2.30.30.40coord: 361..420
e-value: 2.0E-14
score: 52.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 640..685
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 863..910
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 997..1070
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 712..739
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 592..615
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..303
NoneNo IPR availableCDDcd00174SH3coord: 482..538
e-value: 1.02653E-12
score: 64.0211
NoneNo IPR availableCDDcd00174SH3coord: 370..418
e-value: 2.64854E-12
score: 62.8655

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020989-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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