TCONS_00021098-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021098-protein
Unique NameTCONS_00021098-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length211

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021098-protein ID=TCONS_00021098-protein|Name=TCONS_00021098-protein|organism=Clytia hemisphaerica|type=polypeptide|length=211bp
MEDCLKFLQAGYKVNGIYRLKAAGFNRPHVFCDQTTLGGGWTTFLRRKDG
SVNFKQNWKMYRNGFGELTSEFWLGNEIVHGLTESSVAPKKSELLINMQI
KGAKSPTYAKYDNFEIGDEASKYILKFSGVSGNASHLTGDNSLNHSNNRR
FSTIDADNDDNSSSCSKSYGSVGWWFGNCVYTVLTADYKNIYWHGSSALA
NFAEMKLRRKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011828XLOC_011828Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021098TCONS_00021098Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 2..210
e-value: 1.1E-49
score: 181.0
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 2..189
e-value: 1.4E-47
score: 162.2
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 1..211
score: 36.361
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 2..209
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 150..206
e-value: 7.8E-12
score: 44.7
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 1..149
e-value: 7.1E-49
score: 165.9

Blast
[Close]
BLAST of TCONS_00021098-protein vs. Swiss-Prot (Human)
Match: TENA (Tenascin OS=Homo sapiens GN=TNC PE=1 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 1.000e-37
Identity = 82/218 (37.61%), Postives = 114/218 (52.29%), Query Frame = 0 
Query:    2 EDCLKFLQAGYKVNGIYRLKAAGFNRP--HVFCDQTTLGGGWTTFLRRKDGSVNFKQNWKMYRNGFGELTSEFWLGNEIVHGLTESSVAPKKSELLINMQIKGAKSPTYAKYDNFEIGDEASKYILKFSGVSGNASHLTGDNSLNHSNNRRFSTIDADNDDNSSSCSKSYGSVGWWFGNCVYTVLTADYKN---------IYWHGSSALANFAEMKLR 208
            +DC + +  G   +G+Y +   G       VFCD T+ GGGW  FLRRK+G  NF QNWK Y  GFG+   EFWLG + ++ +T    A  + EL ++++  G  +  +A YD F +GD  ++Y LK  G SG A    GD S+ + N R FST D D D   ++C+ SY    +W+ NC    L   Y +          +W G      FAEMKLR
Sbjct: 1982 KDCSQAMLNGDTTSGLYTIYLNGDKAEALEVFCDMTSDGGGWIVFLRRKNGRENFYQNWKAYAAGFGDRREEFWLGLDNLNKIT----AQGQYELRVDLRDHGETA--FAVYDKFSVGDAKTRYKLKVEGYSGTA----GD-SMAYHNGRSFSTFDKDTDSAITNCALSYKG-AFWYRNCHRVNLMGRYGDNNHSQGVNWFHWKGHEHSIQFAEMKLR 2187
The following BLAST results are available for this feature:
BLAST of TCONS_00021098-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENA1.000e-3737.61Tenascin OS=Homo sapiens GN=TNC PE=1 SV=3[more]
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