TCONS_00021731-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021731-protein
Unique NameTCONS_00021731-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length609

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021731-protein ID=TCONS_00021731-protein|Name=TCONS_00021731-protein|organism=Clytia hemisphaerica|type=polypeptide|length=609bp
IFECFRYDVNKYGGLVNLETSLFLSVLLIFLDFGADKMDLNNMPPKPPPY
VMCYLCGRKYGTKSIVIHEPSCIKKWHAENKKLPKHLRRKMPTKPDYSKL
ASGDYDGNYVDQMNDAAYKAAQEQLIPCGNCGRTFLPERLQVHQKSCTVD
NPMKSRTGGKPASSSSSNPEINNNRPTTSDGNSVNPTQSNTPSKIIHKNK
LCCLCMKKIPTSILPNHLVKCNDSKIVELKNSDDLSEPSPSSSVERKNTF
NKGKIAQKPKASSSTSSQESVNQSTYDLDDSQSVERPSTRTLKRRTPSNN
TQGTYDVDSPDEDPVPPKPKPSKTNKPKKSPINQAPSSNNDFADQVDQQQ
GDVSLTPCHLCNRKFASDRIDKHMVICQKTSSKNRKVFDSSKQRSVGSDA
NPLKKSSSSSSAPKKGGGNWRQTHEDFIRSIRAAKQVTKHMASGGKASDL
PPPPPSLNPNYVHCQYCDRRFNPEVAERHIPKCATTQNRPKPPKQKALDV
YNKKPQPKTTSKPVSSARKKPSNQKVGSNNNLLRQSSSGGYNSPTIDRGY
QNYDTPSSSKQSFSRSSPRQQGNDPYKAKTFNGINNRTPAANRGFTYNAM
NHTGPNFFG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012192XLOC_012192Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021731TCONS_00021731Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.390.10coord: 333..429
e-value: 2.0E-12
score: 46.8
coord: 41..108
e-value: 3.6E-5
score: 23.5
coord: 434..531
e-value: 1.9E-8
score: 34.0
coord: 109..197
e-value: 2.3E-12
score: 46.6
NoneNo IPR availablePFAMPF13913zf-C2HC_2coord: 53..72
e-value: 2.2E-6
score: 27.3
coord: 355..378
e-value: 8.6E-8
score: 31.8
coord: 124..147
e-value: 1.2E-9
score: 37.7
coord: 462..483
e-value: 2.9E-6
score: 27.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..353
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..591
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 382..422

Blast
[Close]
BLAST of TCONS_00021731-protein vs. Swiss-Prot (Human)
Match: ZN474 (Zinc finger protein 474 OS=Homo sapiens GN=ZNF474 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.642e-32
Identity = 74/194 (38.14%), Postives = 104/194 (53.61%), Query Frame = 0 
Query:   43 MPPKPPPYVMCYLCGRKYGTKSIVIHEPSCIKKWHAENKKLPKHLRRKMPTKPDYSKLASGDYDGNYVDQMNDAAYKAAQEQLIPCGNCGRTFLPERLQVHQKSCTVDNPMKSRTGGKPASSSSSNPEINNNRPTTSDGNSVNPTQSNTPSKIIHKNKLCCLCMKKIPTSILPNHLVKC-------NDSKIVEL 229
            +P + P + +CY+CGR++G++SI IHEP C++KWH EN KLPKHLRR  P+KP     +            N+AA+++AQ QL+PC +CGRTFLP+ L VH +SC            KP       P  N++   T     +    S TP++   +  +C +C K+  T  LP H  KC       ND   VEL
Sbjct:   87 IPARRPGFRVCYICGREFGSQSIAIHEPQCLQKWHIENSKLPKHLRRPEPSKPQSLSSSGSYSL----QATNEAAFQSAQAQLLPCESCGRTFLPDHLLVHHRSC------------KPKGEGPRAPHSNSSDHLT----GLKKACSGTPARP--RTVICYICGKEFGTLSLPIHEPKCLEKWKMENDRLPVEL 258
The following BLAST results are available for this feature:
BLAST of TCONS_00021731-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN4742.642e-3238.14Zinc finger protein 474 OS=Homo sapiens GN=ZNF474 ... [more]
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