TCONS_00021746-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021746-protein
Unique NameTCONS_00021746-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length144

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021746-protein ID=TCONS_00021746-protein|Name=TCONS_00021746-protein|organism=Clytia hemisphaerica|type=polypeptide|length=144bp
NSCIIEENKLQNVANKKIEMAAKIQEQLQKEIDVFQKMQKDLQKLVTGRQ
QLDVQYNENKVVKDELDLVEPDSNVYKLTGPILVKQDLSEAKLNVGKRLD
YIQSELKRHEKSITDLQGKQEKKKESLTKLQQQYQQLLPKQAAK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012206XLOC_012206Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021746TCONS_00021746Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002777PFD_beta-like
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Cellular Component
TermDefinition
GO:0016272prefoldin complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
cellular_component GO:0016272 prefoldin complex
molecular_function GO:0051082 unfolded protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..45
NoneNo IPR availableCOILSCoilCoilcoord: 113..133
NoneNo IPR availableGENE3D1.10.287.370coord: 20..137
e-value: 2.0E-27
score: 95.0
NoneNo IPR availableCDDcd00632Prefoldin_betacoord: 28..125
e-value: 6.01123E-19
score: 76.2717
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 27..132
IPR002777Prefoldin beta-likePFAMPF01920Prefoldin_2coord: 29..133
e-value: 2.1E-22
score: 78.9

Blast
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BLAST of TCONS_00021746-protein vs. Swiss-Prot (Human)
Match: PFD6 (Prefoldin subunit 6 OS=Homo sapiens GN=PFDN6 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.990e-36
Identity = 58/117 (49.57%), Postives = 92/117 (78.63%), Query Frame = 0 
Query:   20 MAAKIQEQLQKEIDVFQKMQKDLQKLVTGRQQLDVQYNENKVVKDELDLVEPDSNVYKLTGPILVKQDLSEAKLNVGKRLDYIQSELKRHEKSITDLQGKQEKKKESLTKLQQQYQQ 136
            MA  IQ++LQ E++ +Q++QKDL K ++GRQ+L+ Q  EN +VK+EL L++  + V+KL GP+LVKQ+L EA+  VGKRLDYI +E+KR+E  + DL+ + E+++E+L +LQQ++Q+
Sbjct:    1 MAELIQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQR 117
The following BLAST results are available for this feature:
BLAST of TCONS_00021746-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PFD62.990e-3649.57Prefoldin subunit 6 OS=Homo sapiens GN=PFDN6 PE=1 ... [more]
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