TCONS_00021933-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021933-protein
Unique NameTCONS_00021933-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length190

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021933-protein ID=TCONS_00021933-protein|Name=TCONS_00021933-protein|organism=Clytia hemisphaerica|type=polypeptide|length=190bp
SXSSRNVPKLDYKSFHVSSTASEHEAMAASRRRKTGANVWQAEEILAEKK
IGRHTKYLIKWAGFGTEDCTWEPRENLLDERLLLYWEDPRAFQRNDIRRV
SFYKERLLTCFESCLKERLKSTRHLDFPVFMFRYFFHGKGVALTRGTWSF
QKKDFKKILPRGWDCCLINSXLFKRKTLKKSYLVVGTVVL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012306XLOC_012306Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021933TCONS_00021933Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR023780Chromo_domain
IPR023779Chromodomain_CS
IPR016197Chromodomain-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 39..91
e-value: 4.8E-12
score: 56.0
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 40..98
score: 13.408
NoneNo IPR availableGENE3D2.40.50.40coord: 27..123
e-value: 3.4E-14
score: 51.9
NoneNo IPR availableCDDcd00024CHROMOcoord: 39..84
e-value: 2.11652E-8
score: 46.8735
IPR023780Chromo domainPFAMPF00385Chromocoord: 40..82
e-value: 5.5E-10
score: 38.9
IPR023779Chromo domain, conserved sitePROSITEPS00598CHROMO_1coord: 57..77
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 36..89

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021933-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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