TCONS_00022329-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00022329-protein
Unique Name	TCONS_00022329-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	517

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00022329-protein ID=TCONS_00022329-protein|Name=TCONS_00022329-protein|organism=Clytia hemisphaerica|type=polypeptide|length=517bp
LRFHFKTCLSVLKKKNIYVLKRFGKVKKMSYNSKTKHLRLLEDKLKGKVA
SLTKADENHELHFKRTLGDEKSKHVVKLEAALGSLIKNVEKLAELYQKND
DPLRSDKSHPFLYKQQIDEVQLEEESFTNSLALYTKKQFFEGIAELAGSK
DQTKYDFLDTSKPETLLFKGERDEIKAKDKQELKRLQIQYQESEIKRLKS
EMTLENLKRKIKIAESQVKSLNLGYSTVDADINKNTKLTVMNEKSRKALQ
DDLDEQMIPLLNELQQLHGIKVLEGNYDLKIFRQDYFLSKQSEVINQLLL
QCSRNYFLTMMYEIELKEHRKIYHLIESSRTLLASEIKKISSRIALLRDP
VLQTNNLNKETISSKDEFMNRIYDALVPVEERDENELYRTYSSLIDRSQI
LSSQLNNLSHKCKDLETQKDKYFDTLESSIITIQKLVGYEEAGLQSQMED
MVGHLEQDLTLAEVQVNDIIKDVMAKKKLLATDSLKELERSVFPNFFNDP
TRLKRTMTEIQSRVQAS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_012521	XLOC_012521	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00022329	TCONS_00022329	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR026206	HAUS3
IPR032733	HAUS3_N

Vocabulary: **Biological Process**
Term	Definition
GO:0051225	spindle assembly

Vocabulary: **Cellular Component**
Term	Definition
GO:0070652	HAUS complex

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051225	spindle assembly
cellular_component	GO:0070652	HAUS complex

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 398..425
None	No IPR available	COILS	Coil	Coil	coord: 176..224
IPR026206	HAUS augmin-like complex subunit 3	PRINTS	PR02089	HAUSAUGMINL3	coord: 135..151 score: 51.47 coord: 179..198 score: 23.12 coord: 113..135 score: 29.89 coord: 260..276 score: 29.41 coord: 298..316 score: 37.5 coord: 360..377 score: 37.5
IPR032733	HAUS augmin-like complex subunit 3, N-terminal	PFAM	PF14932	HAUS-augmin3	coord: 30..200 e-value: 4.8E-17 score: 62.2

Blast

[Close]

BLAST of TCONS_00022329-protein vs. Swiss-Prot (Human)
Match: HAUS3 (HAUS augmin-like complex subunit 3 OS=Homo sapiens GN=HAUS3 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.490e-30
Identity = 117/414 (28.26%), Postives = 208/414 (50.24%), Query Frame = 0

Query:  123 EEESFTNSLALYTKKQFFEGIAELAGSKDQTKYDFLDTSKPETLLFKGERDEIKAKDKQELKRLQIQYQESEIKRLKSEMTLENLKRKIKIAESQVKSLN---LGYSTVDADINKNTKLTVMNEKSRKALQDDLDEQMIPLLNELQQLHGIKVLEGNYDLKIFRQDYFLSKQSEVINQLLLQCSRNYFLTMMYEIELKEHRKIYHLIESSRTLLASEIKKISSRIALLRDPVLQTNNLNKETISSKDEFMNRIYDALVPVEERDENELYRTYS-------------SLIDRSQILSSQLNN--LSHKCKDLETQKDKYFDTLESSIITIQKLVGYEEAGLQSQMEDMVGHLEQDLTLAEVQVNDIIKDVMAKKKLLATDSLKELERSVFPNFFNDPTRLKRTMT--EIQSRVQA 516
            +EE  T +L LYTKKQFF+GI E+  S ++  +  LD   P       +  EI  + + E+ RLQ+ Y  ++ + +  + +  ++K  IK AE  + SL    +    +DA I+  T   +  EK    ++D     +  ++ E  QL  + V++G++DL+I +QDY+ ++Q  V+NQL+ Q +    L + YEIEL++HR IY  +E+    L+     +  ++ +L DP +      + TI +KD   +R+Y  L    E  + EL+ T+              SL+     +S+Q ++  LS + KD++   D  +      +++ Q+L   +   ++SQ+ + + HL          + DI+ DV  K+K LA + L ++ER  +  F  D   LK  +   E QS+++A
Sbjct:  206 QEEQSTAALTLYTKKQFFQGIHEVVESSNEDNFQLLDIQTPSIC----DNQEILEERRLEMARLQLAYICAQHQLIHLKASNSSMKSSIKWAEESLHSLTSKAVDKENLDAKISSLTSEIMKLEKEVTQIKD---RSLPAVVRENAQLLNMPVVKGDFDLQIAKQDYYTARQELVLNQLIKQKASFELLQLSYEIELRKHRDIYRQLENLVQELSQSNMMLYKQLEMLTDPSVSQQINPRNTIDTKDYSTHRLYQVLEG--ENKKKELFLTHGNLEEVAEKLKQNISLVQDQLAVSAQEHSFFLSKRNKDVDMLCDTLYQGGNQLLLSDQELTE-QFHKVESQL-NKLNHL----------LTDILADVKTKRKTLANNKLHQMEREFYVYFLKDEDYLKDIVENLETQSKIKA 598

The following BLAST results are available for this feature:

BLAST of TCONS_00022329-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00022329-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HAUS3	2.490e-30	28.26	HAUS augmin-like complex subunit 3 OS=Homo sapiens...	[more]

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TCONS_00022329-protein (polypeptide) - C. hemisphaerica