TCONS_00022390-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00022390-protein
Unique Name	TCONS_00022390-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1113

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00022390-protein ID=TCONS_00022390-protein|Name=TCONS_00022390-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1113bp
MLRYNFRPSLVDHAQIMILVRSFYNCSDQDHNFVLRKLGVFSYATIKDSD
RRLLLRFTKGYNRDVLEWGRIQLHRRPLGFIGVACLSNDPVQQPKDYDRI
VHRFDNLISQYESFLYDSRCIIVGPENPSIENLRKDIIYLPITELDITDG
FEKAVADFISSLFVILESKRVEKISENFERMVMPSAPCEQEQTISDADTR
QMKRKCLGRNKKILADLCLMAGLYPESLVHYNNSVEHLRNVNDYLWMGAG
LEGVCAASNIMTIGDQALKASRYTRGLVIDQTNIQINVTTDSAFEEQLRN
MTILDDNGMIAKYSECLSCFKRFSSTGPLEMESHFKFIRALIRMQKKLEV
AQVIQCLLLLPISSNLNEVEKIDFSSVLSSIHEQLSLHRKAAFYRRRAAM
YYVQSNPGKPALAKAMSYLQEVCPSYKLQMEQPTNVEKKHDSNKGWPSIQ
LIILLDMLNITRKLGNKLDSVRLLCFILERYGDHLNPETHSELVDLLEEF
SDDTSPLVNETKDDVVQLIRPLPIIRDFAAKRLAHYLQPLKVKKAESDGP
FIFSALSSKMKKDEGDIIWVSGDVSEVAMVVDNPLPAEIKVNNMTLITEG
TEFEAHPATLALPADSGSFPFMLLGTPIKPGSLSIKGYRVEVLGISNVVL
LPEPITVEVTPMLPILKLSSTLPRAPNSSSLNPEDKHYQTLFTSANLYRG
HSCTGQVTLENAGKVAVTKLDIKLNKPKEVNVIFNEEQVQKQLPLAPGDS
IHLDVVIMPEASWKLYNNKDKIETMLIMSYSCEEGEQGGYTREIYWVTII
KVMPSLEFSNLELFEIERQPDLCLICFDVENMTSISMNVVCAVENNDPET
ADISSFSTLLEDLDIVLESKKKTSVEVSFPRISLPLPPKFKRQTIEDVYE
KFVSQSICFKWRLKDTNYSGVTYFQNLKITPEMVPVLKPKHLNINIRVND
NRIKDGEFLPIPKNSMVCISVVLTNFHELDIDDITLHVNPYQRCHRSVEA
MNQLCLPSGIMNKGIKKLCPGETFEHSCGLFFLYEGEFMIDISCSANRKF
GTPTPKRQRAFAIGENVPGSPPPSTNGDKKMSWSTPLSPGSVSKKLKYHE
ADFWAQTFALNVK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_012556	XLOC_012556	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00022390	TCONS_00022390	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom
IPR013935	TRAPP_II_complex_Trs120

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 164..548 e-value: 2.0E-4 score: 20.1
IPR013935	TRAPP II complex, Trs120	PFAM	PF08626	TRAPPC9-Trs120	coord: 906..1029 e-value: 6.1E-6 score: 23.8 coord: 72..260 e-value: 8.1E-15 score: 53.2 coord: 344..646 e-value: 7.0E-25 score: 86.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1063..1084

Blast

[Close]

BLAST of TCONS_00022390-protein vs. Swiss-Prot (Human)
Match: TPPC9 (Trafficking protein particle complex subunit 9 OS=Homo sapiens GN=TRAPPC9 PE=1 SV=2)

HSP 1 Score: 376.326 bits (965), Expect = 3.437e-112
Identity = 275/927 (29.67%), Postives = 448/927 (48.33%), Query Frame = 0

Query:   12 DHAQIMILVRSFYNCSDQDHNFVLRKLGVFSYATIKDSDRRLLLRFTKGYNRDVLEWGRIQLHRRPLGFIGVA-CLSNDPVQQPKDYDRIVHRFDNLISQYESFLYDSRCIIVGPENPSIENLRKDIIYLPITELDITDGFEKAVADFISSLFVILESKRVEKISE-NFERMVMPSAPCEQEQTIS-DADTRQMKRKCLGRNKKILADLCLMAGLYPESLVHYNNSVEHLRNVNDYLWMGAGLEGVCAASNIM-----TIGDQALK-----------ASRYTRG---LVIDQTNIQINVTTDSAFEEQLRNMTILDDNGMIAKYSECLSCFKRFSSTGPLEMESHFKFIRALIRMQKKLEVAQVIQCLLLLPISSNLNEVEKIDFSSVLSSIHEQLSLHRKAAFYRRRAAMYYVQSNPGKPALAKAMSYLQEVCPSYKLQMEQPTNVEKKHDSNKGWPSIQLIILLDMLNITRKLGNKLDSVRLLCFILERYGDHLNPETHSELVDLLEEFSDDTSPLVNETKDDVVQLIRP------LPIIRDFAAKRLAHYLQPLKVKK-----AESDGPFIFSALSSKMKKDEG----DIIWVSGDVSEVAMVVDNPLPAEIKVNNMTLITEGTEFEAHPATLALPADSGSFPFMLLGTPIKPGSLSIKGYRVEVLGISNVVLL-------PEPITVEVTPMLPILKLSSTLPRAPNSSSLNPEDKHYQTLFTSANLYRGHSCTGQVTLENAGKVAVTKLDIKLNKPKEVNVIFNE------EQVQKQLPLAPGD--------SIHLDV----------------------------VIMPEASWKL-----------YNNKDKIETMLIMSYSCEEGEQGGYTREIYWVTIIKVMPSLEFSNLELFEI--ERQPDLCLICFDVENMTSISMNV 839
            DH  ++++V+     S+++   + +++   S  +++DS R L +R+   Y  +  EWG  Q HR+ +G I +  C S       KD+ +   +F      Y S LYDSR  + G +   +E  R D+ + P  E   T   EK + DFI SLF++LESKR+++ ++ + +++ +   P E++  +  D D+R  K++C GR +K + DLCL AG+  +SLVHY+ SVE LR+VND+LW+GA LEG+C+AS I      T G    +           A+R+  G   ++ID   +  N        E  R    L    +I KY E +S + ++ + G +E+E+  K +R L   ++ +E ++ +Q  + + +   L+E EKI   S+LS ++E +  HRK+AF++R AAM  V  +  +P        L E  P Y L ++ P +  +   +++GW ++Q+ +L +++  +R++GN   SVR L F+L+   D L+ +   ++   LE ++    P   E       L  P      LPI+R      L   L+P K+K        +  PFI+S + +  + +E     D  WV GDV EV ++V NP+P E++V NM L+T G EFE+ PA L+LPA+SG +P  L+G P   G++++ GY   V G+ +  LL           TVEV P LP L++S++LPR+  + SL P      +   S  LY G S    + LEN G   + KL++          ++ +      E+   Q PL PG          + LD                             V+ P    K            Y++   +E +L   YS   G   GY R +     ++V PS+ F+ +        RQ   C +  DV N T   + V
Sbjct:   12 DHQTLLVVVQPVGIVSEENFFRIYKRICSVSQISVRDSQRVLYIRYRHHYPPENNEWGDFQTHRKVVGLITITDCFS------AKDWPQTFEKFHVQKEIYGSTLYDSRLFVFGLQGEIVEQPRTDVAFYPNYEDCQT--VEKRIEDFIESLFIVLESKRLDRATDKSGDKIPLLCVPFEKKDFVGLDTDSRHYKKRCQGRMRKHVGDLCLQAGMLQDSLVHYHMSVELLRSVNDFLWLGAALEGLCSASVIYHYPGGTGGKSGARRFQGSTLPAEAANRHRPGAQEVLIDPGALTTNGINPDTSTEIGRAKNCLSPEDIIDKYKEAISYYSKYKNAGVIELEACIKAVRVLAIQKRSMEASEFLQNAVYINLR-QLSEEEKIQRYSILSELYELIGFHRKSAFFKRVAAMQCVAPSIAEPGWRACYKLLLETLPGYSLSLD-PKDFSR--GTHRGWAAVQMRLLHELVYASRRMGNPALSVRHLSFLLQTMLDFLSDQEKKDVAQSLENYTSKC-PGTMEPIALPGGLTLPPVPFTKLPIVRHVKLLNLPASLRPHKMKSLLGQNVSTKSPFIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYNPMPFELRVENMGLLTSGVEFESLPAALSLPAESGLYPVTLVGVPQTTGTITVNGYHTTVFGVFSDCLLDNLPGIKTSGSTVEVIPALPRLQISTSLPRS--AHSLQPSSGDEISTNVSVQLYNGESQQLIIKLENIGMEPLEKLEVTSKVLTTKEKLYGDFLSWKLEETLAQFPLQPGKVATFTINIKVKLDFSCQENLLQDLSDDGISVSGFPLSSPFRQVVRPRVEGKPVNPPESNKAGDYSHVKTLEAVLNFKYSGGPGHTEGYYRNLSLGLHVEVEPSVFFTRVSTLPATSTRQ---CHLLLDVFNSTEHELTV 920

The following BLAST results are available for this feature:

BLAST of TCONS_00022390-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00022390-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TPPC9	3.437e-112	29.67	Trafficking protein particle complex subunit 9 OS=...	[more]

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TCONS_00022390-protein (polypeptide) - C. hemisphaerica