TCONS_00022506-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022506-protein
Unique NameTCONS_00022506-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length689

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022506-protein ID=TCONS_00022506-protein|Name=TCONS_00022506-protein|organism=Clytia hemisphaerica|type=polypeptide|length=689bp
MAYNDQNDGRYTSPSSNQDSSTNASWRMSGLINELEGRCKSLEEDNKRLG
EMVHKYKTEFEVETSYLKKQVSNEHEKQLKWKNLYYNARSEITELKHQLH
QMRPQKLPSKPPPPSSSNAPISCSGAPSSSASLSITTTSNELSDLNNNTP
IVIPPSHIRRMPPHTSLDSGCKECENERKRTSSESEPTTMAPLHSRYAML
SPTAIGSSSLHPSPKDHHHGSEHHLPMFPSPQTPSYTQPIVGKPPHPLTS
PTGSNLYYECRICYRRYDTEQKLHFHQQVHARARPPSIGDYPPEVGPPPS
SLGAPNVEYCTECPESFVNDEEYRKHLLVHMFKCRYCNIVLESETEYVVH
MKTHSDTIPLYVCYICDKQLGSVQQLTRHILSHPDELNFYCKECNKSFTH
RTQLNHHMAVHSSRPYTCKECGKKFAHKTHLRRHEVVHSGLRPHKCRVCN
QSFSRKSSLSRHYFIHTTEKPFVCPICEKGFNRKGRLKNHLNIHIREGYS
QLKDYVIERRPITREFIEQMNQVTSDDPVHDDMPGYTTMTDLHQRAPSFV
VKSEPQEYEMKEHSANYTKGDESEESSCSDTDEGEIDENEADMSEEITFD
HQAPSDARQPPRSATLPPHAAEAEDLDRERMESAHRPRKRTYSDHTIHEG
VRAFDHAHPRPHSRESLPTMERGTAQESSRSRDLRSPNA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012627XLOC_012627Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022506TCONS_00022506Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..59
NoneNo IPR availableGENE3D3.30.160.60coord: 423..437
e-value: 4.2E-11
score: 42.2
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 389..411
e-value: 3.5E-4
score: 20.8
coord: 416..438
e-value: 6.3E-4
score: 20.0
coord: 444..466
e-value: 0.0029
score: 17.9
coord: 472..494
e-value: 3.8E-4
score: 20.7
NoneNo IPR availableGENE3D3.30.160.60coord: 438..456
e-value: 2.9E-11
score: 42.8
NoneNo IPR availableGENE3D2.30.30.380coord: 403..422
e-value: 1.7E-8
score: 34.0
NoneNo IPR availableGENE3D3.30.160.60coord: 320..343
e-value: 1.4E-4
score: 21.4
NoneNo IPR availableGENE3D3.30.160.60coord: 388..402
e-value: 2.4E-5
score: 23.9
NoneNo IPR availableGENE3D3.30.160.60coord: 344..369
e-value: 3.3E-6
score: 26.8
coord: 257..319
e-value: 9.7E-7
score: 28.6
coord: 457..479
e-value: 2.0E-17
score: 62.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 551..586
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..689
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 444..466
e-value: 0.0074
score: 25.5
coord: 389..411
e-value: 0.0017
score: 27.6
coord: 332..354
e-value: 0.0057
score: 25.9
coord: 416..438
e-value: 0.0014
score: 27.9
coord: 361..383
e-value: 0.061
score: 22.5
coord: 308..330
e-value: 0.79
score: 18.8
coord: 472..494
e-value: 4.0E-4
score: 29.7
coord: 258..280
e-value: 5.3
score: 15.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 474..494
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 260..280
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 418..438
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 446..466
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 334..354
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 332..359
score: 9.598
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 444..471
score: 14.711
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 361..388
score: 8.995
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 389..416
score: 12.632
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 258..285
score: 11.635
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 472..499
score: 11.219
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 416..443
score: 16.415
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 397..453
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 442..494
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 360..411
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 480..516
e-value: 2.1E-9
score: 36.8
coord: 370..387
e-value: 2.2E-4
score: 20.7

Blast
BLAST of TCONS_00022506-protein vs. Swiss-Prot (Human)
Match: ZN420 (Zinc finger protein 420 OS=Homo sapiens GN=ZNF420 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.839e-36
Identity = 85/267 (31.84%), Postives = 133/267 (49.81%), Query Frame = 0
Query:  258 YECRICYRRYDTEQKLHFHQQVHARARPPSIGDYPPEVGPPPSSLGAPNVEY-----------CTECPESFVNDEEYRKHLLVHM----FKCRYCNIVLESETEYVVHMKTHSDTIPLYVCYICDKQLGSVQQLTRHILSHPDELNFYCKECNKSFTHRTQLNHHMAVHSS-RPYTCKECGKKFAHKTHLRRHEVVHSGLRPHKCRVCNQSFSRKSSLSRHYFIHTTEKPFVCPICEKGFNRKGRLKNHLNIHIREGYSQLKDYVIE 508
            Y+C+ C + ++    L  HQ++H   +P     Y  +      S G+   ++           C EC +SF+   +  +H  +H     ++C+ C +     +    H + H+   P YVC  C K       L +H   H  E  + CKEC K+F   +QL  H  +H+  +PY CKECGK F+H + L  H+ +H+G +P++CR C ++F++ S LSRH  IHT EKP+ C  C K F R  +L  H  IHI E   + K+  I+
Sbjct:  419 YQCKECGKAFNRGSLLTRHQRIHTGEKP-----YECKECGKTFSRGSELTQHERIHTGEKPYECKECGKSFIRGSQLTQHQRIHTGEKPYECKECRMAFTQSSHLSQHQRLHTGEKP-YVCNECGKAFARGLLLIQHQRIHTGEKPYQCKECGKAFIRGSQLTQHQRIHTGEKPYECKECGKAFSHGSQLTLHQRIHTGEKPYECRECRKAFTQSSHLSRHQRIHTGEKPYQCKECGKAFTRGSQLTQHQRIHISEKSFEYKECGID 679          

HSP 2 Score: 138.658 bits (348), Expect = 4.294e-34
Identity = 84/251 (33.47%), Postives = 127/251 (50.60%), Query Frame = 0
Query:  252 TGSNLYYECRICYRRYDTEQKLHFHQQVHARARPPSIGDYPPEVGPPPSSLGAPNVEYCTECPESFVNDEEYRKHLLVHM----FKCRYCNIVLESETEYVVHMKTHSDTIPLYVCYICDKQLGSVQQLTRHILSHPDELNFYCKECNKSFTHRTQLNHHMAVHSS-RPYTCKECGKKFAHKTHLRRHEVVHSGLRPHKCRVCNQSFSRKSSLSRHYFIHTTEKPFVCPICEKGFNRKGRLKNHLNIHIRE 497
            TG  LY EC+ C + +    +L  H+++H        G+ P E               C EC ++F+   +  +H  +H     ++C+ C       +  + H + H+   P Y C  C K      QLT+H   H +E  + CKEC K F+H +QL  H  +H+  +PY CKECGK F   + L RH+ +H+G +P++C+ C ++FSR S L++H  IHT EKP+ C  C K F R  +L  H  IH  E
Sbjct:  274 TGEKLY-ECKECRKVFTQLSQLILHKRIHT-------GEKPYE---------------CKECGKAFICGSQLSQHQKIHNGEKPYECKECGRAFIRGSLLMQHQRIHTGEKP-YKCEECGKAFIRGSQLTQHQRIHTNEKPYECKECGKMFSHGSQLTQHQRIHTGEKPYQCKECGKAFNRGSLLTRHQRIHTGEKPYECKECGKTFSRGSELTQHERIHTGEKPYECKECGKSFIRGSQLTQHQRIHTGE 500          

HSP 3 Score: 136.346 bits (342), Expect = 1.960e-33
Identity = 78/258 (30.23%), Postives = 127/258 (49.22%), Query Frame = 0
Query:  258 YECRICYRRYDTEQKLHFHQQVHARARPPSIGDYPPEVGPPPSSLGAPNVE------YCTECPESFVNDEEYRKHLLVHM----FKCRYCNIVLESETEYVVHMKTHSDTIPLYVCYICDKQLGSVQQLTRHILSHPDELNFYCKECNKSFTHRTQLNHHMAVHSS-RPYTCKECGKKFAHKTHLRRHEVVHSGLRPHKCRVCNQSFSRKSSLSRHYFIHTTEKPFVCPICEKGFNRKGRLKNHLNIHIREGYSQLKD 504
            YEC+ C + +  + +L  HQ++H   +P +  +           +    +        C EC ++F+   +  +H  VH     ++C+ C       ++  +H + H+    LY C  C K    + QL  H   H  E  + CKEC K+F   +QL+ H  +H+  +PY CKECG+ F   + L +H+ +H+G +P+KC  C ++F R S L++H  IHT EKP+ C  C K F+   +L  H  IH  E   Q K+
Sbjct:  167 YECKQCGKAFSRDSQLSLHQRLHTGEKPYACKECGKAFTQSSQLILHHRIHTGEKPYKCEECGKAFIRSSQLTRHQKVHTGEKPYECKECGKAFTQNSQLTLHQRLHTGE-KLYECKECRKVFTQLSQLILHKRIHTGEKPYECKECGKAFICGSQLSQHQKIHNGEKPYECKECGRAFIRGSLLMQHQRIHTGEKPYKCEECGKAFIRGSQLTQHQRIHTNEKPYECKECGKMFSHGSQLTQHQRIHTGEKPYQCKE 423          

HSP 4 Score: 130.568 bits (327), Expect = 1.470e-31
Identity = 83/266 (31.20%), Postives = 124/266 (46.62%), Query Frame = 0
Query:  237 TQPIVGKPPHPLTSPTGSNLYYECRICYRRYDTEQKLHFHQQVHARARPPSIGDYPPEVGPPPSSLGAPNVEYCTECPESFVNDEEYRKHLLVHM----FKCRYCNIVLESETEYVVHMKTHSDTIPLYVCYICDKQLGSVQQLTRHILSHPDELNFYCKECNKSFTHRTQLNHHMAVHSS-RPYTCKECGKKFAHKTHLRRHEVVHSGLRPHKCRVCNQSFSRKSSLSRHYFIHTTEKPFVCPICEKGFNRKGRLKNHLNIHIRE 497
            +Q I+ K  H    P      YEC+ C + +    +L  HQ++H        G+ P E               C EC  +F+      +H  +H     +KC  C       ++   H + H++  P Y C  C K      QLT+H   H  E  + CKEC K+F   + L  H  +H+  +PY CKECGK F+  + L +HE +H+G +P++C+ C +SF R S L++H  IHT EKP+ C  C   F +   L  H  +H  E
Sbjct:  292 SQLILHKRIHTGEKP------YECKECGKAFICGSQLSQHQKIHN-------GEKPYE---------------CKECGRAFIRGSLLMQHQRIHTGEKPYKCEECGKAFIRGSQLTQHQRIHTNEKP-YECKECGKMFSHGSQLTQHQRIHTGEKPYQCKECGKAFNRGSLLTRHQRIHTGEKPYECKECGKTFSRGSELTQHERIHTGEKPYECKECGKSFIRGSQLTQHQRIHTGEKPYECKECRMAFTQSSHLSQHQRLHTGE 528          

HSP 5 Score: 127.487 bits (319), Expect = 1.587e-30
Identity = 82/273 (30.04%), Postives = 130/273 (47.62%), Query Frame = 0
Query:  258 YECRICYRRYDTEQKLHFHQQVHARARPPSIGDYPPEVGPPPSSLGAPNVEYCTECPESFVNDEEYRKHLLVH----MFKCRYCNIVLESETEYVVHMKTHSDTIPLYVC------YICDKQLGSVQQ----------------------LTRHILSHPDELNFYCKECNKSFTHRTQLNHHMAVHSS-RPYTCKECGKKFAHKTHLRRHEVVHSGLRPHKCRVCNQSFSRKSSLSRHYFIHTTEKPFVCPICEKGFNRKGRLKNHLNIHIRE 497
            Y+C  C + +    +L  HQ+VH        G+ P E               C EC ++F  + +   H  +H    +++C+ C  V    ++ ++H + H+   P Y C      +IC  QL   Q+                      L +H   H  E  + C+EC K+F   +QL  H  +H++ +PY CKECGK F+H + L +H+ +H+G +P++C+ C ++F+R S L+RH  IHT EKP+ C  C K F+R   L  H  IH  E
Sbjct:  223 YKCEECGKAFIRSSQLTRHQKVHT-------GEKPYE---------------CKECGKAFTQNSQLTLHQRLHTGEKLYECKECRKVFTQLSQLILHKRIHTGEKP-YECKECGKAFICGSQLSQHQKIHNGEKPYECKECGRAFIRGSLLMQHQRIHTGEKPYKCEECGKAFIRGSQLTQHQRIHTNEKPYECKECGKMFSHGSQLTQHQRIHTGEKPYQCKECGKAFNRGSLLTRHQRIHTGEKPYECKECGKTFSRGSELTQHERIHTGE 472          

HSP 6 Score: 125.176 bits (313), Expect = 9.450e-30
Identity = 81/255 (31.76%), Postives = 117/255 (45.88%), Query Frame = 0
Query:  258 YECRICYRRYDTEQKLHFHQQVHARARPPSIGDYPPEVGPPPSSLGAPNVEY----------CTECPESFVNDEEYRKHLLVHM----FKCRYCNIVLESETEYVVHMKTHSDTIPLYVCYICDKQLGSVQQLTRHILSHPDELNFYCKECNKSFTHRTQLNHHMAVHSS-RPYTCKECGKKFAHKTHLRRHEVVHSGLRPHKCRVCNQSFSRKSSLSRHYFIHTTEKPFVCPICEKGFNRKGRLKNHLNIHIRE 497
            Y+C+ C + +     L  HQ +H   +P        + G   S     ++            C EC ++F    +   H  +H     +KC  C       ++   H K H+   P Y C  C K      QLT H   H  E  + CKEC K FT  +QL  H  +H+  +PY CKECGK F   + L +H+ +H+G +P++C+ C ++F R S L +H  IHT EKP+ C  C K F R  +L  H  IH  E
Sbjct:  139 YKCKECGKAFRRASHLTQHQSIHTGEKPYEC----KQCGKAFSRDSQLSLHQRLHTGEKPYACKECGKAFTQSSQLILHHRIHTGEKPYKCEECGKAFIRSSQLTRHQKVHTGEKP-YECKECGKAFTQNSQLTLHQRLHTGEKLYECKECRKVFTQLSQLILHKRIHTGEKPYECKECGKAFICGSQLSQHQKIHNGEKPYECKECGRAFIRGSLLMQHQRIHTGEKPYKCEECGKAFIRGSQLTQHQRIHTNE 388          

HSP 7 Score: 98.9821 bits (245), Expect = 1.784e-21
Identity = 47/123 (38.21%), Postives = 73/123 (59.35%), Query Frame = 0
Query:  376 LTRHILSHPDELNFYCKECNKSFTHRTQLNHHMAVHSS-RPYTCKECGKKFAHKTHLRRHEVVHSGLRPHKCRVCNQSFSRKSSLSRHYFIHTTEKPFVCPICEKGFNRKGRLKNHLNIHIRE 497
            L++H   H  E  + CKEC K+F   + L  H ++H+  +PY CK+CGK F+  + L  H+ +H+G +P+ C+ C ++F++ S L  H+ IHT EKP+ C  C K F R  +L  H  +H  E
Sbjct:  126 LSQHSRCHSTEKPYKCKECGKAFRRASHLTQHQSIHTGEKPYECKQCGKAFSRDSQLSLHQRLHTGEKPYACKECGKAFTQSSQLILHHRIHTGEKPYKCEECGKAFIRSSQLTRHQKVHTGE 248          

HSP 8 Score: 90.8929 bits (224), Expect = 7.633e-19
Identity = 53/134 (39.55%), Postives = 75/134 (55.97%), Query Frame = 0
Query:  398 FTHRTQLNHHMAVHSS-RPYTCKECGKKFAHKTHLRRHEVVHSGLRPHKCRVCNQSFSRKSSLSRHYFIHTTEKPFVCPICEKGFNRKGRLKNHLNIHIREGYSQLKDYVIERRPITREFIEQMNQVTSDDPVH 530
            F   T L+ H   HS+ +PY CKECGK F   +HL +H+ +H+G +P++C+ C ++FSR S LS H  +HT EKP+ C  C K F +  +L  H  IH  E     K Y  E     + FI + +Q+T    VH
Sbjct:  120 FNQHTYLSQHSRCHSTEKPYKCKECGKAFRRASHLTQHQSIHTGEKPYECKQCGKAFSRDSQLSLHQRLHTGEKPYACKECGKAFTQSSQLILHHRIHTGE-----KPYKCE--ECGKAFI-RSSQLTRHQKVH 245          
The following BLAST results are available for this feature:
BLAST of TCONS_00022506-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN4202.839e-3631.84Zinc finger protein 420 OS=Homo sapiens GN=ZNF420 ... [more]
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