TCONS_00022688-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022688-protein
Unique NameTCONS_00022688-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length382

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022688-protein ID=TCONS_00022688-protein|Name=TCONS_00022688-protein|organism=Clytia hemisphaerica|type=polypeptide|length=382bp
ILSMGRINKFSWLVFAGCFVMTFLYSYNVTYFAPKMENIELLKKEIGYVK
NRLSAVDNELRQKLKDLKTEFYELHANQTSRLTRMVQTIEKLKARIKLNT
YKKDVKRPNVELINQKDIKAQDAQIMVLVTSHIGHKNRRDSIRMNWGDSS
KFSKRLQQNYGNKTTYKVYFMTGYLQSEMENAGNESAVHKDMLIMNRAEH
YFDLSRRVMFGFLWSFENCQYDYLLKADDDVFIHIPNLFKLIHQDPFVLK
HKDRLYAGNMFMNLGPHRNEKSKWHVPKEEWEPNKYPPFAPGMGVVLSRH
VVGKIIPHFDWLKPFRLDDVYIGMLVYKANVTGMGIRKQVGAEFYDNINN
RKFCAFPSTRIIAFHKVLENKCMTHLTNRSRQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012753XLOC_012753Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022688TCONS_00022688Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002659Glyco_trans_31
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008378galactosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0008378 galactosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 50..70
NoneNo IPR availableGENE3D3.90.20.10coord: 10..141
e-value: 9.3E-4
score: 18.2
IPR002659Glycosyl transferase, family 31PFAMPF01762Galactosyl_Tcoord: 137..331
e-value: 1.4E-33
score: 116.3

Blast
[Close]
BLAST of TCONS_00022688-protein vs. Swiss-Prot (Human)
Match: B3GN2 (N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 OS=Homo sapiens GN=B3GNT2 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.550e-23
Identity = 78/258 (30.23%), Postives = 129/258 (50.00%), Query Frame = 0 
Query:  112 LINQKDIKAQDAQIMVLVTSHIGHKNRRDSIRMNWGDSSKFSKRLQQNYGNKTTYKVYFMTGYLQSEMENAGN-------ESAVHKDMLIMNRAEHYFDLSRRVMFGFLWSFENC-QYDYLLKADDDVFI---HIPNLFKLIHQDPFVLKHKDRLYAGNMFMNLGPHRNEKSKWHVPKEEWEPNKYPPFAPGMGVVLSRHVVGKIIPHFDWLKPFRLDDVYIGMLVYKANVTGMGIRKQVGAEFYD--NINNRKFCAF 356
            LI+Q D  A+   +++ + S   H  RR +IR +WG  S        N GN+T  +V F+ G    E +N  +       ES  H+D+L+ N  + +F+LS + +    W   +C   +++ K DDDVF+   HI N    + +     K KD L+ G++  N GPHR++K K+++P+  +    YPP+A G G + S H+  ++    D +  + +DDVY GM + K    G+   K  G   +D    N    C++
Sbjct:  131 LIDQPDKCAKKPFLLLAIKSLTPHFARRQAIRESWGQES--------NAGNQTVVRV-FLLGQTPPE-DNHPDLSDMLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEFVFKGDDDVFVNTHHILNYLNSLSKT----KAKD-LFIGDVIHNAGPHRDKKLKYYIPEVVYS-GLYPPYAGGGGFLYSGHLALRLYHITDQVHLYPIDDVYTGMCLQK---LGLVPEKHKGFRTFDIEEKNKNNICSY 369
The following BLAST results are available for this feature:
BLAST of TCONS_00022688-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B3GN21.550e-2330.23N-acetyllactosaminide beta-1,3-N-acetylglucosaminy... [more]
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