TCONS_00022806-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022806-protein
Unique NameTCONS_00022806-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length818

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022806-protein ID=TCONS_00022806-protein|Name=TCONS_00022806-protein|organism=Clytia hemisphaerica|type=polypeptide|length=818bp
MIKLFHDRENPFDKFNTSTVKKTLNPKWDFEFHCLVKTDRDKMLLEIFDE
NRVTRDDFLGETEIPFSNDVDDAPRDYLLHRRSHKSRVRGHIMVSIEKID
TGAHDETDGSAARHIARDLVNLMERDISHGPPSLETGFESVSLQDAAEAE
AEVRARDRDNSVRRHISSSTSRQSSRTSSIRQPEPDPLPEGWEERQDANG
RIFFVNHTSRSTTWTRPTVDTPTEERRRPFDDAMNIRRHISMDDTVSESS
STPTTPTSQDVEEPLPPGWEERRNVNGQTLYIDHNSRTTTWNRPSSSNQL
EPSTPVASAPAPEESESPPPPEEPEDEQSASTVERLHPDIPSQSEMPLPA
GWAMQLAPNNRVFFVDHNNRTTSWVDPRVNTQPATQDLGPLPAGWEERVH
FDGRVFFIDHDTQSTQWEDPRLQTVAKQKSEALPYSRDYKRKYDFFRSRL
KRPDNVPNKYEIHVRRTSIMDDSFRFVLSQCTKVDLLKTKLWIVFDGEAG
LDYGGVAREWFYLLSKEIFNPYYGLFEYSATDNYTLQINPNSGMCNDDHL
RYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLNKKITLTDLESVDSEYH
NSLVWLLENDPEDLDLRFQVEEEVFGEVVSRDLKPGGEDIPVTNANKREY
IDSVIRWRFMDRINEQMKSFMQGFRDIIPQTLIQVFDDRELEYLMCGLGE
IDSDDWRKHTQYRGGYHDKHVVIQWFWKAVITFDKEMRARLLQFVTGTSR
VPMNGFAELYGSNGPQKFAIERWGNPHQLPRAHTCFNRLDLPNYGSYHEL
REKLRLAIENTEGFEGVD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012818XLOC_012818Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022806TCONS_00022806Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR000569HECT_dom
IPR024928E3_ub_ligase_SMURF1
IPR000008C2_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0004842ubiquitin-protein transferase activity
GO:0061630ubiquitin protein ligase activity
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
molecular_function GO:0005515 protein binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 264..296
e-value: 1.4E-9
score: 47.9
coord: 187..219
e-value: 7.1E-13
score: 58.8
coord: 390..422
e-value: 8.3E-12
score: 55.2
coord: 347..379
e-value: 8.7E-10
score: 48.5
IPR001202WW domainPFAMPF00397WWcoord: 188..217
e-value: 4.0E-11
score: 42.7
coord: 265..294
e-value: 1.2E-6
score: 28.3
coord: 348..377
e-value: 1.4E-8
score: 34.6
coord: 391..420
e-value: 1.8E-10
score: 40.6
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 192..217
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 352..377
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 395..420
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 389..422
score: 17.968
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 346..379
score: 15.604
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 186..219
score: 17.87
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 263..296
score: 16.55
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 261..295
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 342..379
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 383..424
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 182..219
IPR000569HECT domainSMARTSM00119hect_3coord: 481..817
e-value: 1.4E-174
score: 596.0
IPR000569HECT domainPFAMPF00632HECTcoord: 512..815
e-value: 3.7E-102
score: 341.8
IPR000569HECT domainPROSITEPS50237HECTcoord: 482..817
score: 118.586
IPR000569HECT domainCDDcd00078HECTccoord: 461..815
e-value: 1.07586E-153
score: 455.101
IPR000569HECT domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 442..811
NoneNo IPR availableGENE3D2.20.70.10coord: 265..296
e-value: 8.8E-11
score: 41.2
NoneNo IPR availableGENE3D2.20.70.10coord: 391..423
e-value: 1.3E-16
score: 59.7
NoneNo IPR availableGENE3D2.20.70.10coord: 297..359
e-value: 2.8E-10
score: 39.5
coord: 169..201
e-value: 2.6E-12
score: 46.0
NoneNo IPR availableGENE3D3.30.2410.10coord: 699..816
e-value: 1.7E-46
score: 156.7
NoneNo IPR availableGENE3D2.20.70.10coord: 360..381
e-value: 1.3E-10
score: 40.5
NoneNo IPR availableGENE3D2.20.70.10coord: 202..226
e-value: 2.9E-8
score: 32.6
NoneNo IPR availableGENE3D3.90.1750.10coord: 436..617
e-value: 5.7E-56
score: 188.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..334
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..393
NoneNo IPR availableCDDcd00201WWcoord: 266..294
e-value: 4.88791E-7
score: 46.367
NoneNo IPR availableCDDcd00201WWcoord: 392..422
e-value: 2.81735E-9
score: 52.9154
NoneNo IPR availableCDDcd00201WWcoord: 349..378
e-value: 5.74806E-7
score: 46.367
NoneNo IPR availableCDDcd00201WWcoord: 189..218
e-value: 8.485E-9
score: 51.7598
IPR024928E3 ubiquitin-protein ligase, SMURF1 typePIRSFPIRSF001569E3_ub_ligase_SMURF1coord: 223..816
e-value: 2.7E-221
score: 735.1
coord: 94..241
e-value: 5.5E-13
score: 46.0
coord: 10..119
e-value: 0.05
score: 9.8
IPR000008C2 domainGENE3D2.60.40.150coord: 2..98
e-value: 1.8E-17
score: 63.0
IPR000008C2 domainPFAMPF00168C2coord: 14..72
e-value: 6.6E-11
score: 42.3
IPR000008C2 domainPROSITEPS50004C2coord: 1..63
score: 10.323
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 12..101

Blast
[Close]
BLAST of TCONS_00022806-protein vs. Swiss-Prot (Human)
Match: NED4L (E3 ubiquitin-protein ligase NEDD4-like OS=Homo sapiens GN=NEDD4L PE=1 SV=2)

HSP 1 Score: 775.393 bits (2001), Expect = 0.000e+0
Identity = 422/923 (45.72%), Postives = 562/923 (60.89%), Query Frame = 0 
Query:   17 TSTVKKTLNPKWDFEFHCLVKTDRDKMLLEIFDENRVTRDDFLGETEIPFSNDVDDAP--------RDYLLHRRSHKSRVRGHIMVSIEKI-DTGAHDE-----------------TDGSAARHIAR-----------DLVNLMERDISHGPPSLETGFESVSLQD-AAEAEAEVR-----ARDRDNSVRRHISSSTSRQSSRTSSIRQPEPDPLPEGWEERQDANGRIFFVNHTSRSTTWTRPTVDTPTEERRRPFD----------------DAMNIRRHISMDDTVSESSSTPT---------TPTSQDVEEP------------LPPGWEERRNVNGQTLYIDHNSRTTTWNRP---------------SSSNQLEP--------STPVASAPAPEESESPPPPEEPEDEQSASTVERLHPDIPSQSEMP----------LPAGWAMQLAPNNRVFFVDHNNRTTSWVDPRVN--------TQPATQDLGPLPAGWEERVHFDGRVFFIDHDTQSTQWEDPRLQTVAKQKSEALPYSRDYKRKYDFFRSRLKRPDNVPNKYEIHVRRTSIMDDSFRFVLSQCTKVDLLKTKLWIVFDGEAGLDYGGVAREWFYLLSKEIFNPYYGLFEYSATDNYTLQINPNSGMCNDDHLRYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLNKKITLTDLESVDSEYHNSLVWLLENDPEDLDLRFQVEEEVFGEVVSRDLKPGGEDIPVTNANKREYIDSVIRWRFMDRINEQMKSFMQGFRDIIPQTLIQVFDDRELEYLMCGLGEIDSDDWRKHTQYRGGYHDKHVVIQWFWKAVITFDKEMRARLLQFVTGTSRVPMNGFAELYGSNGPQKFAIERWGNPHQLPRAHTCFNRLDLPNYGSYHELREKLRLAIENTEGFEGVD 818
            T T+KKTLNPKW+ EF+  V     ++L E+FDENR+TRDDFLG+ ++P S+   + P        +D+LL  RSHKSRV+G + + +  +   G  DE                 ++ SA++H              + V+ + R       +  T +   SL D ++E++  +R     A  R    RRHIS     + S    +    P+P     EE   A   +        ++  +R +    +EE  R                   +  +  R  S+ D V+E    P          + T    EEP            LP GWEER++  G+T Y++HN+RTTTW RP               S+++ +EP        S+P  +  AP E       + P       T+       PS    P          LP GW M++APN R FF+DHN +TT+W DPR+         T     DLGPLP GWEER+H DGR F+IDH+++ TQWEDPRLQ  A     A+PYSR++K+KYD+FR +LK+P ++PN++E+ + R +I ++S+R ++S   + D+LK +LWI F+ E GLDYGGVAREWF+LLSKE+FNPYYGLFEYSATDNYTLQINPNSG+CN+DHL YF FIGRVAG+AV+HGKLLD FFIRPFYKMML K+ITL D+ESVDSEY+NSL W+LENDP +LDL F ++EE FG+    DLKP G +I VTN NKREYID VI+WRF++R+ +QM +F++GF +++P  LI++FD+ ELE LMCGLG++D +DWR+H+ Y+ GY   H VIQWFWKAV+  D E R RLLQFVTGTSRVPMNGFAELYGSNGPQ F IE+WG+P +LPRAHTCFNRLDLP Y ++ +LREKL +A+EN +GFEGVD
Sbjct:   63 TKTIKKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPYTFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNHNNRTTQWHRPSLMDVSSESDNNIRQINQEAAHRRFRSRRHISEDLEPEPSEGGDV----PEPWETISEEVNIAGDSLGLALPPPPASPGSRTSPQELSEELSRRLQITPDSNGEQFSSLIQREPSSRLRSCSVTDAVAEQGHLPPPSAPAGRARSSTVTGGEEPTPSVAYVHTTPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSATNSNNHLIEPQIRRPRSLSSPTVTLSAPLEGAK----DSPVRRAVKDTLSNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRLKFPVHMRSKTSLNPNDLGPLPPGWEERIHLDGRTFYIDHNSKITQWEDPRLQNPAI-TGPAVPYSREFKQKYDYFRKKLKKPADIPNRFEMKLHRNNIFEESYRRIMS-VKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWILENDPTELDLMFCIDEENFGQTYQVDLKPNGSEIMVTNENKREYIDLVIQWRFVNRVQKQMNAFLEGFTELLPIDLIKIFDENELELLMCGLGDVDVNDWRQHSIYKNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGSPEKLPRAHTCFNRLDLPPYETFEDLREKLLMAVENAQGFEGVD 975
The following BLAST results are available for this feature:
BLAST of TCONS_00022806-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NED4L0.000e+045.72E3 ubiquitin-protein ligase NEDD4-like OS=Homo sap... [more]
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