TCONS_00023606-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023606-protein
Unique NameTCONS_00023606-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length253

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023606-protein ID=TCONS_00023606-protein|Name=TCONS_00023606-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MSGKDRINVFPSRMAMTTMKQRLKGAQKGHSLLKKKSDALTMRFRKILKT
IIDTKVMMGDVMKEASFSLTEAYFAAGDFSLVITENVDKAWTKVRTKNDN
VAGVKLPVFEAYTDGANTYELTGLSRGGQQVNNCATTFNKALKLLVELAS
LQTAFVTLDEAIKITNRRVNAIEHVIIPRIERTIAYITSELDEMEREEFY
RLKKIQEKKKKNKAVKEEALKQYQLDHQHEKVKDTEPKNILADNEDDEDL
LFT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013271XLOC_013271Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023606TCONS_00023606Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002699V_ATPase_D
IPR011990TPR-like_helical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 202..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..253
IPR002699ATPase, V1 complex, subunit DPFAMPF01813ATP-synt_Dcoord: 16..207
e-value: 4.2E-79
score: 264.9
IPR002699ATPase, V1 complex, subunit DTIGRFAMTIGR00309TIGR00309coord: 8..211
e-value: 6.7E-67
score: 223.1
IPR002699ATPase, V1 complex, subunit DHAMAPMF_00271ATP_synth_D_archcoord: 6..212
score: 17.429
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 59..251
e-value: 0.0019
score: 16.7

Blast
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BLAST of TCONS_00023606-protein vs. Swiss-Prot (Human)
Match: VATD (V-type proton ATPase subunit D OS=Homo sapiens GN=ATP6V1D PE=1 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 1.298e-117
Identity = 170/252 (67.46%), Postives = 202/252 (80.16%), Query Frame = 0 
Query:    1 MSGKDRINVFPSRMAMTTMKQRLKGAQKGHSLLKKKSDALTMRFRKILKTIIDTKVMMGDVMKEASFSLTEAYFAAGDFSLVITENVDKAWTKVRTKNDNVAGVKLPVFEAYTDGANTYELTGLSRGGQQVNNCATTFNKALKLLVELASLQTAFVTLDEAIKITNRRVNAIEHVIIPRIERTIAYITSELDEMEREEFYRLKKIQEKKKKNKAVKEEALKQYQLDHQHEKVKDTEPKNILADNEDDEDLLF 252
            MSGKDRI +FPSRMA T MK RLKGAQ G +LLKKKSDALT+RFR+ILK II+TK++MG+VM+EA+FSL EA F AGDFS  + +NV+KA  K+R K DNVAGV LPVFE Y +G ++YELTGL+RGG+Q+      + KA++LLVELASLQT+FVTLDEAIKITNRRVNAIEHVIIPRIERT+AYI +ELDE EREEFYRLKKIQEKKK  K   E+ L+Q +   +       EP N+LA+ E DEDLLF
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEV-----LEPANLLAE-EKDEDLLF 246
The following BLAST results are available for this feature:
BLAST of TCONS_00023606-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VATD1.298e-11767.46V-type proton ATPase subunit D OS=Homo sapiens GN=... [more]
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