TCONS_00024407-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024407-protein
Unique NameTCONS_00024407-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length374

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024407-protein ID=TCONS_00024407-protein|Name=TCONS_00024407-protein|organism=Clytia hemisphaerica|type=polypeptide|length=374bp
MLMYCRNHLSRLKLSNKVIISSSQCGCSTQVSPPLKKKRKLIYAKGKTFV
DWKRIYIKSGNGGNGSASFVHSRDHKGGPDGGDGGRGADVIFIADDAYSQ
LSHLEHQYRAKNGGNGSKKNRHGKNGEHIHIHIPVGTVITNSNSDKELAD
LTRKGEAYTVAKGGSKGLGNVHFKSPTRVRPREFTEGGTGEEIFVELELK
SIADIGLVGFPNAGKSSLLHCISRATPKIGDYPFTTLKPNIGVMNLKDDL
TVSVADIPGIVKGAHENVGLGHEFLRHVERCHMLMYVMDCSSPDMLSQFE
ILKKELDLYKAGLSTISSIFIANKIDLIQDQDEMRNNIQQHVNMPVVPLS
AKFNQNIEELKSLILQKRKFKHTS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013697XLOC_013697Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024407TCONS_00024407Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR005225Small_GTP-bd_dom
IPR006169GTP1_OBG_dom
IPR014100GTP-bd_Obg/CgtA
IPR035101GTP-bd_Obg
IPR031167G_OBG
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO:0000287magnesium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0000287 magnesium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPRINTSPR00326GTP1OBGcoord: 226..244
score: 45.83
coord: 271..289
score: 32.85
coord: 254..269
score: 48.81
coord: 205..225
score: 50.99
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 204..309
e-value: 5.9E-22
score: 77.8
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 203..363
e-value: 2.3E-12
score: 45.0
IPR006169GTP1/OBG domainPFAMPF01018GTP1_OBGcoord: 50..200
e-value: 5.3E-47
score: 159.2
IPR006169GTP1/OBG domainGENE3D2.70.210.12coord: 48..199
e-value: 4.0E-47
score: 159.2
IPR006169GTP1/OBG domainSUPERFAMILY82051Obg GTP-binding protein N-terminal domaincoord: 49..200
IPR014100GTP-binding protein Obg/CgtATIGRFAMTIGR02729TIGR02729coord: 49..366
e-value: 2.1E-111
score: 370.0
IPR014100GTP-binding protein Obg/CgtAHAMAPMF_01454GTPase_Obgcoord: 48..369
score: 37.928
IPR035101GTP-binding protein, Obg-typePIRSFPIRSF002401GTP-binding_obgcoord: 46..374
e-value: 1.7E-120
score: 400.3
NoneNo IPR availableGENE3D3.40.50.300coord: 202..372
e-value: 1.5E-35
score: 121.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..84
IPR031167OBG-type guanine nucleotide-binding (G) domainPROSITEPS51710G_OBGcoord: 203..369
score: 64.618
IPR031167OBG-type guanine nucleotide-binding (G) domainCDDcd01898Obgcoord: 203..367
e-value: 1.26E-76
score: 235.397
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 197..370

Blast
[Close]
BLAST of TCONS_00024407-protein vs. Swiss-Prot (Human)
Match: MTG2 (Mitochondrial ribosome-associated GTPase 2 OS=Homo sapiens GN=MTG2 PE=1 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.869e-71
Identity = 138/316 (43.67%), Postives = 202/316 (63.92%), Query Frame = 0 
Query:   47 KTFVDWKRIYIKSGNGGNGSASFVHSRDHK--GGPDGGDGGRGADVIFIADDAYSQLSHLEHQYRAKNGGNGSKKNRHGKNGEHIHIHIPVGTVITNSNSDKELADLTRKGEAYTVAKGGSKGLGNVHFKSPTRVRPREFTEGGTGEEIFVELELKSIADIGLVGFPNAGKSSLLHCISRATPKIGDYPFTTLKPNIGVMNLKDDLTVSVADIPGIVKGAHENVGLGHEFLRHVERCHMLMYVMDCSSPDMLSQFEILKKELDLYKAGLSTISSIFIANKIDLIQDQDEMRNNIQQHVNMPVVPLSAKFNQNIEEL 360
            + FVD++R+ +  GNGG G++ F HS   K  GGPDGGDGG G  VI   D     LS +  +Y+  +G +G  KN  G++G  ++I +PVGT++      + +ADL+  G+ Y  A GG+ G GN  F +     P   T G  G++  + LELK++A  G+VGFPNAGKSSLL  IS A P +  YPFTTLKP++G+++ +  L ++VADIPGI++GAH+N GLG  FLRH+ERC  L++V+D S P+  +Q + LK EL++Y+ GLS      +ANKIDL + Q  + + ++ H+   V+ LSA   +N+E+L
Sbjct:   70 RYFVDYRRVLVCGGNGGAGASCF-HSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGG--RVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANL-SQLRDHLGQEVIVLSALTGENLEQL 381
The following BLAST results are available for this feature:
BLAST of TCONS_00024407-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTG24.869e-7143.67Mitochondrial ribosome-associated GTPase 2 OS=Homo... [more]
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