TCONS_00024428-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024428-protein
Unique NameTCONS_00024428-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length300

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024428-protein ID=TCONS_00024428-protein|Name=TCONS_00024428-protein|organism=Clytia hemisphaerica|type=polypeptide|length=300bp
MSRRRMSNSQDVFIACRVGDVRWLEKITSNEKEKQAALSTRDGKGFLPIH
IAAMECKLDALKYLVEKLSCCIDSATLSGWTALHFSINNNKKMESLKCMD
YLLMKGADIDRQTDHGMSALHLASSIGHIEEVRLLLKRGATVDLKDTSNR
MAFIYATLWGHQKVARLLAHQMWFKQKNDKELSRQTFDKYSNELRKRFVK
EKKVMKSIRQEIAETAYKEWHMKNDFIYNPYAFGQILYDRTNFQKSPSTR
ATSVRSISRQRLDSKTLLQRGKMTRTRESLTRTNDRSVTLLPLSDFYKTI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013711XLOC_013711Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024428TCONS_00024428Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 44..74
e-value: 12.0
score: 14.8
coord: 115..144
e-value: 1.8E-4
score: 30.9
coord: 78..111
e-value: 0.11
score: 21.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 78..114
score: 9.484
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 115..147
score: 14.185
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 105..253
e-value: 1.9E-20
score: 72.6
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 96..170
e-value: 2.7E-10
score: 40.6
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 1..80
e-value: 2.0E-12
score: 46.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 33..168
score: 27.292
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 14..169
NoneNo IPR availablePFAMPF13637Ank_4coord: 48..89
e-value: 1.1E-6
score: 29.0
NoneNo IPR availableGENE3D2.40.10.190coord: 81..104
e-value: 0.11
score: 12.3
NoneNo IPR availableCDDcd00204ANKcoord: 41..168
e-value: 2.91068E-27
score: 102.847

Blast
[Close]
BLAST of TCONS_00024428-protein vs. Swiss-Prot (Human)
Match: ANR53 (Ankyrin repeat domain-containing protein 53 OS=Homo sapiens GN=ANKRD53 PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 5.667e-25
Identity = 69/215 (32.09%), Postives = 108/215 (50.23%), Query Frame = 0 
Query:   13 FIACRVGDVRWLEKITSNEKEKQAALSTRDGKGFLPIHIAAMECKLDALKYLVEKLSCCIDSATLSGWTALHFSINNNKKMESLKCMDYLLMKGADIDRQTDHGMSALHLASSIGHIEEVRLLLKRGATVDLKDTSNRMAFIYATLWGHQKVARLLAHQMWFKQKND--KELSRQTFDKYSNELRKR-----FVKEKKVMKSIRQEIAETAYKEW 220
              A  VG+V WL +   N+  ++      D KGF  IH AA   KL  L+ LVE+    +D  T +  T LH  I+ +    +L C+ YLL KGAD++ QT +G + LHLA+  G ++ V++L++ GA V  +D        +  +W H+  AR L   MW K K D  +E+++    K    L +      + KE K+++       E A ++W
Sbjct:  112 LFAAAVGNVEWL-RFCLNQSLREIPT---DDKGFTAIHFAAQWGKLACLQVLVEEYKFPVDLLTNNSQTPLHLVIHRDNTTVALPCIYYLLEKGADLNAQTCNGSTPLHLAARDGLLDCVKVLVQSGANVHAQDAMGYKPIDFCKIWNHRACARFLKDAMWKKDKKDFAREMTKMKMFKSQLTLMEHNYLIEYQKEHKILR-------EAAIRKW 315
The following BLAST results are available for this feature:
BLAST of TCONS_00024428-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANR535.667e-2532.09Ankyrin repeat domain-containing protein 53 OS=Hom... [more]
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