TCONS_00024601-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024601-protein
Unique NameTCONS_00024601-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length506

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024601-protein ID=TCONS_00024601-protein|Name=TCONS_00024601-protein|organism=Clytia hemisphaerica|type=polypeptide|length=506bp
MLYSRGLKRLITSLNKNKGYLSVGVRCSSVDYTYKNYNVPRRDNLKKVEE
SDINYFKSFLGDRVVTDVDELEVHNRDWLNLVRGMSPVMLKPKTTQEVSQ
IMKYCNENSLGVCPQGGNTGLVGGSVPVFDEVILSLNLLNKIHEIDATSG
TVECGAGVILENLDKELEKHDLMVPLDLGAKGSCHIGGNVATNAGGIRYL
RYGSLHGNVLGVEAVLPDGTILDCLSTLKKDNTGYDLKQLFIGSEGTLGI
ITGLSLMAPPRPLATNVAFLGVESYEAVKEAYVKAKGCLAEILSAFEFLD
NHAMSTVKENLGYSNPISEHPFYVLVETSGSNDGHDAEKLDHFLEVVMET
GIAVDGTVANEVGKMQDIWKMREHIAEALLHDGDGCFKYDISLPVDVMYD
IVSLLREKYSHCTNRIVGYGHFGDGNLHLNVVAPTYDKELMYELEPIIFG
FTSKHNGSISAEHGIGFKKTKHMHYSRSPEAIEVMKKLKNLFDPKGILNP
YKMLPS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013815XLOC_013815Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024601TCONS_00024601Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016167FAD-bd_2_sub1
IPR016171Vanillyl_alc_oxidase_C-sub2
IPR016169CO_DH_flavot_FAD-bd_sub2
IPR006094Oxid_FAD_bind_N
IPR004113FAD-linked_oxidase_C
IPR016166FAD-bd_2
IPR016164FAD-linked_Oxase-like_C
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050660flavin adenine dinucleotide binding
GO:0016491oxidoreductase activity
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016167FAD-binding, type 2, subdomain 1GENE3D3.30.43.10coord: 35..140
e-value: 2.7E-28
score: 97.6
IPR016171Vanillyl-alcohol oxidase, C-terminal subdomain 2GENE3D1.10.45.10coord: 464..503
e-value: 1.3E-13
score: 50.4
IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2GENE3D3.30.465.10coord: 141..261
e-value: 4.0E-42
score: 142.3
IPR006094FAD linked oxidase, N-terminalPFAMPF01565FAD_binding_4coord: 89..224
e-value: 1.0E-36
score: 125.6
IPR004113FAD-linked oxidase, C-terminalPFAMPF02913FAD-oxidase_Ccoord: 262..502
e-value: 3.0E-55
score: 187.5
IPR016166FAD-binding, type 2PROSITEPS51387FAD_PCMHcoord: 82..261
score: 25.739
IPR016166FAD-binding, type 2SUPERFAMILY56176FAD-binding/transporter-associated domain-likecoord: 52..262
IPR016164FAD-linked oxidase-like, C-terminalSUPERFAMILY55103FAD-linked oxidases, C-terminal domaincoord: 265..505

Blast
[Close]
BLAST of TCONS_00024601-protein vs. Swiss-Prot (Human)
Match: D2HDH (D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=D2HGDH PE=1 SV=3)

HSP 1 Score: 547.74 bits (1410), Expect = 0.000e+0
Identity = 269/507 (53.06%), Postives = 355/507 (70.02%), Query Frame = 0 
Query:    5 RGLKRLITSLNKNKGYLSVGVRCSS-----VDYTYKNYNVPRRDNLKKVEESDINYFKSFLGDRVVTDVDELEVHNRDWLNLVRGMSPVMLKPKTTQEVSQIMKYCNENSLGVCPQGGNTGLVGGSVPVFDEVILSLNLLNKIHEIDATSGTVECGAGVILENLDKELEKHDLMVPLDLGAKGSCHIGGNVATNAGGIRYLRYGSLHGNVLGVEAVLPDGTILDCLSTLKKDNTGYDLKQLFIGSEGTLGIITGLSLMAPPRPLATNVAFLGVESYEAVKEAYVKAKGCLAEILSAFEFLDNHAMSTVKENLGYSNPISEHPFYVLVETSGSNDGHDAEKLDHFLEVVMETGIAVDGTVANEVGKMQDIWKMREHIAEALLHDGDGCFKYDISLPVDVMYDIVSLLREKYSHCTNRIVGYGHFGDGNLHLNVVAPTYDKELMYELEPIIFGFTSKHNGSISAEHGIGFKKTKHMHYSRSPEAIEVMKKLKNLFDPKGILNPYKMLPS 506
            RG      S  +  G L+    CS+     V  T + Y V RR     V + D+  F+  +   VVTD + L+  N DWL  +RG S V+L+P+T++EVS I+++C+E +L V PQGGNTG+VGGSVPVFDE+ILS   +N++    + SG + C AG +LE L + +E+ D ++PLDLGAKGSCHIGGNVATNAGG+R+LRYGSLHG VLG+E VL DGT+LDCL++L+KDNTGYDLKQLFIGSEGTLGIIT +S++ PP+P A NVAFLG   +  V + +   KG L EILSAFEF+D   M  V  +L  ++P+ E PFYVL+ETSGSN GHDAEKL HFLE  + +G+  DGT+A +  K++ +W +RE I EAL  DG   +KYD+SLPV+ +YDIV+ LR +       +VGYGH GDGNLHLNV A  +   L+  LEP ++ +T+   GS+SAEHG+GF+K   + YS+ P A+++M++LK L DPKGILNPYK LPS
Sbjct:   15 RGAPGAAGSWGRPVGPLARRGCCSAPGTPEVPLTRERYPV-RRLPFSTVSKQDLAAFERIVPGGVVTDPEALQAPNVDWLRTLRGCSKVLLRPRTSEEVSHILRHCHERNLAVNPQGGNTGMVGGSVPVFDEIILSTARMNRVLSFHSVSGILVCQAGCVLEELSRYVEERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLHGTVLGLEVVLADGTVLDCLTSLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPPKPRAVNVAFLGCPGFAEVLQTFSTCKGMLGEILSAFEFMDAVCMQLVGRHLHLASPVQESPFYVLIETSGSNAGHDAEKLGHFLEHALGSGLVTDGTMATDQRKVKMLWALRERITEALSRDGY-VYKYDLSLPVERLYDIVTDLRARLGPHAKHVVGYGHLGDGNLHLNVTAEAFSPSLLAALEPHVYEWTAGQQGSVSAEHGVGFRKRDVLGYSKPPGALQLMQQLKALLDPKGILNPYKTLPS 519
The following BLAST results are available for this feature:
BLAST of TCONS_00024601-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
D2HDH0.000e+053.06D-2-hydroxyglutarate dehydrogenase, mitochondrial ... [more]
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