|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00024863-protein ID=TCONS_00024863-protein|Name=TCONS_00024863-protein|organism=Clytia hemisphaerica|type=polypeptide|length=3451bp
MGVVPPCWLKLLLLAFLFVSVIRADVSSDRLIKRSKRSLEDEIGDGLYEE
APIVKREEIPILKDSNASAEEDSSDDEDSKSSKSVADQTVASKRHLHQAK
LTSAQNDVVMVKDEQTRHEEKAEENAQLRSDTINNTPSIEQPIQTRSNLL
TTDDNDDTDNLIPIGPADQLVKRNTINKPNNKTVDVTGGKRGNIEFHNLE
SGAHEIVVHRPGVVFHPPPEVIHRPNIVIHRAPLLIQRPSIIVHQPPVVI
HRPPVYVHQPDVVFKTPAPIVHQPHFHSHDVYAHRPHLHHVHSDLEYLDH
AASFHGHHHGHHHYGPALMGNLGGSGHAGDLGGLSEEGLGQHGYAGSYGG
FGEADHGYSGNILNHGVGFDDSALGFHHSFGGAFHHHPGQLGLGHGLYDN
YNGEGVFDTQHEDYGNHEPYQRGSTYFDQGLGDVYGLKQYGKMKGMNHVG
VGLARSKINDKEESSADDADSDDDRDDDDDTTDDKLNKRDFVDTNAYTRS
IIIPEPAKTAKFIMKEHHHQQRKDNIESSPPTENASESPDEQISSEDAAQ
NFEQPKDNLEETSDSPVGHLFPNGHQPSVEELTAMAEKGDEESSANEDAS
NAETRSTEESPQQPESRPVEEAPAASRSSVTKAHHHKKKSHLSRLNHKSN
AEKKQDISARCLSCGNSCPTDCFDSHHFGAGDLSLADGHLGGYGGGISAG
IAGFAHGGSGYGYGTVATGYGSGYGGGYGGIGGYGGFGGYAHGGAYGNHG
YVGNLGGCEGGYGDCGHHVGHHETVVNRPDIVVPQPPDVVHRPDIVIHRK
PIIIHRRPVFYHQNPIVVHKPPVVVHQSPVYVHPVVHHHRIITHHVHDYH
IEPQIQHSGCECQGKRDCLCDPDNNNSKRAHIEEGKFNKTAFKKQDIASR
CLDCGDHCDPDCPGLSGGAVGVGGGYAGGVGGAGCVDQVPLVHCEHRTDE
RVFNRPDILVPQPPDIIHRPDIVIHRAPIVIHRRPVVYHQSPIVVHKPPV
VVHQAPIIVHPVVHHHRVVTHHVHDYHVMPHHLDTGCSCAGKKDCICDNK
EPQQEVNVSPTAENEPEQASVNARSNIPKPTTKRTVISKTNTTQEDYTKG
KKKKKDVVVSRPPIIYHPPPEIYHRPDIVVHRPPLLIHRPSIIYHQPPVI
VHRPAVVYHQPPLVFHQPPPAVQQPLLVSHDSFRVHPSATYQHMGSVVNK
VGSYVGVPHGPISNYPHSRFYDERGYGPAPPMGYRDYGNEHLSYAGPLGD
HAPFVEHGGLPVANDMAGGFQHGGFAHQPVGHAFGHELGMGHGIGFDRGV
GYAGHGAGFVGHAPMESGYGNHIYGPAANEGFDHGFAGHNTGFMGVQRGE
SYGNEALDNFGRMPGTSSPLHEAMGSRRELLPESFERNPGPSEGYERNLG
PAPEAGFPNQGEAAEEGPMGRLPQGEFKRSSIVHPKVRRSLKEEEDEDDE
ELDEDEHKDEAEKRNHVVVARPDIIYHQPPEIVHRAPVVVHRPDVVIHRP
PVVVHRPSVIVHKPDVILHQPPVVFNTPGPMVHQPHAVSHDMYVTHPVPE
YHGSEYQHVGGMTTTPAVLGHVSNMGHSVSYGTNECADGSEDCGPTNFGE
EEFDFPVNGGNSVPFGAGTGIGGFAGGYGGLGGYGHGYAGYGGSYGGIGH
AYGGYGGFGHGYGAAVGRNEINEPEPEEPEEEHAETKSKVEKPHKKSLHK
KKEKHTKATKKQILGGGHIAVGVSGAAGHGFVGGFADHGGLYHDGGVGGI
AGGVHSGLGGNGAGCDGHVAADGADCGHVGGYGYGGHGYGGYGGHGYGGG
YGYGGGYGHHAGYGYGDHGCVGDHCGWGGNYRGGPTGGTQTTVLYRPDVV
FHPRPELYHRPDIIVHRPDVVIHRPSVVIHQPPVLVHRPAVLLHQPPILF
HQPPPHVHRPEVVSHDAYVTHATHEHVDSHWEHVGTTAGHGGYYADCDGH
AAANGADCGHVGAGYGGAHTAAYADGVAADAGAGYHGIGLNGGPGYGGAG
YAGHGDHVSFGYGGHHGTGAFAVGAGDHGANGAGFGSGVLDYHHGVGGGV
VGDAGVAGVGGAVYSHDGVGQGYGHGIAGYGGHVASFDGHGIAGPAHASP
NAVHAYGKSHVEKAKKRSHHSHHKVRRDVTEDDDDEELDEDEREEKRSTV
EKAEKKHHVTVIHRPDVIFHQRPEIIHRPDVVVHRPDIVINRPDVVIHRP
AVVVHKPPLRIHQSPIVFHQTHPVVHQPIHQSHDMFVEHHVPVHVGSQFE
HTGGQTFGAGYYPCHDEQPGCFNGYAEGGYGGIGHGAGLGGFGAGYGAGF
GGGFHGGVGGFGYGKDAIETPEKEEVKEENPSTRSKVSKKSKKGSKKHHV
TVVARPDIVFHQRPEVVHRPPVVVHRPPLVIHRPPVVVHRPDYVVHKPDV
LVHQPPIVFHQPAPLVHRPVVQSHDAYVTHHIPVHVGSHLTHVGNNFDNG
CYGSSDCDGVSGYGYGGHGYGYGGLGYGGHGYGYGSYGYGGHGYGGDLNV
GVGYNNNVAIETGDCGGHGCGFKKEKVEGKEEKVKKDKGKSDKKEDSKSV
TASKRFFGGHGFGGHGGGYGGSGHGGGYGGHGYGGYGHGDGGYGGYGGHG
GGYGGQGGGYGGHGGDYGGYGGHGGYGGYGGHGYGGDHGCYGDHCWGGNH
RHGPHADEQHVVVSRPDIVFHPRPELYHRPDIIVHRPDIVIHRPSVVIHQ
PPVLVHRPSVIYHQPPVVFNQPGPVVHRPNVVSHDNYVAHAHHELVGSSI
EHGHGGHTGYGGHYEGHDMGHHGDHGYGGYGGHGGYGGGYGGHGGGYGGH
GGGFGGHGFSGFGHHFGGFGHHGGFGGHGGYGGGHGGGYGGGHGYRSHIP
HPKNEKGGKKNRVIVARPDIVYHQPPEIVHRADLIVHRPDVIIRRPAVVV
HRPPVVVHRPDIVYHQPPVVFNTPPPAVHQPFVESHDQYVTHPVYEHVAS
NLHHVGGETFTAGHHAYGDDCAHEGFGYGCSYGATGNGLGDGLAGGYGAG
YAGGYGHAGYAAGYGAGFAGQPGFAGSFAGHAGEGDVVGVVPGNEAIGDH
VLSGGEESTRPATDVGATRDDVADSADAPADATAAGNADKKSKTKSRPKR
SLLHKLSKKEKVEEDEDAESKKVKAKQSKKNDIVVKRPPVIYHPPPEIYH
RPPIIVHRPPLVIRRPPIIYHQPPVIVHRPAVVYHQPPLVFHQPPPAVSQ
PILKSHDTFMMHPAAHLSHMGSIVTNAGTYVGVPEHRFMYQGGMGFFHAG
EHADGAAVAGHAGGYVGGYGAGYTGAGYAGAPAAVHGGDMVPMHGPATAM
ATGRDTLEGGMEQAGPAEGAEQGEAAPQMEAPAEEGSQAFGGSQAFGGQD
FPAPEQGMVNQEEKSQTDKISKISKRKFISRIAKVRNAVRSKRQVSAEPS
YAYRHSDVPYDYAPFPYAARRPHKTTVNVDVVGKRSVDDVNNNNDGDHFL
F Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 2136..2156 |
| None | No IPR available | COILS | Coil | Coil | coord: 1438..1458 |
| None | No IPR available | COILS | Coil | Coil | coord: 111..131 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 3074..3130 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 3307..3370 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1057..1104 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 456..487 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1667..1709 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 2106..2157 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 62..139 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 2321..2348 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 3048..3067 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1364..1465 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 2526..2550 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 515..651 |
Blast
The following BLAST results are available for this feature:
|
