TCONS_00026134-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00026134-protein
Unique Name	TCONS_00026134-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	646

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00026134-protein ID=TCONS_00026134-protein|Name=TCONS_00026134-protein|organism=Clytia hemisphaerica|type=polypeptide|length=646bp
MAQYNFKKIQVIPTSKDFIDIVLSKTQRKTPTVIHKQYQITRIRSFYLKK
IKYTQQNYHDKLTQIITDFPRMEDIHPFYADLMNVLYDKDHYKLALGQIN
TARHLIDNVAKDYARLMKYGDSMYRCKQLKKAALGRMCTIMRRQNQSLQY
LEQVRQHLSRLPSIDPNTRTLLLTGFPNVGKSSFMNKVTRADVEVQPYAF
TTKSLYVGHTDYQYLRWQVVDTPGILDHALEERNTIEMQAITALAHLRAA
VLYVMDISEQCNKSLAEQIELYNSIKPLFTNKPIIICLNKVDIMKMEELS
DEKKELFKQFEEDGVPIIPMSNLSEEGVMKVKSEACDRLLAQRVEVKLKN
AKKMDEVVNRLHIAMPKPRDDKERPPFIPEAVKKKMNSMQVDSSDRKLQK
HLEQELLEEYKFDDKALYFVKDDEKYDIIPEIINGKNIADYIDEDIFEKL
EQLEKEEELKEAAGVYDSDEEEENSEDEEIRKTAELIRKEKKIRLQEHRL
KKGQASNGPVLPRKASIRLENFGRSRKRKSEEAMELDGDVEMNSDGESKP
RSRSAVKKIVKKRKLEKSEARSQSAAAHRSKSLNTPRDKSGIKNPEDREK
AKKKARLSQRKMNYMGKAGESDRHIHEKMPKHLFSGKRKQGKTDRR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_014693	XLOC_014693	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00026134	TCONS_00026134	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006073	GTP_binding_domain
IPR010674	NOG1_Rossman_fold_dom
IPR024926	NOG1
IPR012973	NOG_C
IPR031167	G_OBG
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005730	nucleolus

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005525	GTP binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 293..313
None	No IPR available	GENE3D	3.40.50.300		coord: 161..363 e-value: 4.1E-32 score: 110.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 497..646
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 459..483
None	No IPR available	CDD	cd01897	NOG	coord: 169..340 e-value: 2.05737E-94 score: 289.46
IPR006073	GTP binding domain	PRINTS	PR00326	GTP1OBG	coord: 171..191 score: 44.17 coord: 192..210 score: 30.22 coord: 219..234 score: 30.6
IPR010674	Nucleolar GTP-binding protein 1, Rossman-fold domain	PFAM	PF06858	NOG1	coord: 235..292 e-value: 1.8E-25 score: 88.3
IPR024926	Nucleolar GTP-binding protein 1	PIRSF	PIRSF038919	NOG1	coord: 1..646 e-value: 1.7E-274 score: 910.4
IPR012973	NOG, C-terminal	PFAM	PF08155	NOGCT	coord: 396..446 e-value: 5.6E-14 score: 51.8
IPR031167	OBG-type guanine nucleotide-binding (G) domain	PROSITE	PS51710	G_OBG	coord: 169..340 score: 49.709
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 49..333

Blast

[Close]

BLAST of TCONS_00026134-protein vs. Swiss-Prot (Human)
Match: NOG1 (Nucleolar GTP-binding protein 1 OS=Homo sapiens GN=GTPBP4 PE=1 SV=3)

HSP 1 Score: 771.541 bits (1991), Expect = 0.000e+0
Identity = 394/648 (60.80%), Postives = 499/648 (77.01%), Query Frame = 0

Query:    1 MAQYNFKKIQVIPTSKDFIDIVLSKTQRKTPTVIHKQYQITRIRSFYLKKIKYTQQNYHDKLTQIITDFPRMEDIHPFYADLMNVLYDKDHYKLALGQINTARHLIDNVAKDYARLMKYGDSMYRCKQLKKAALGRMCTIMRRQNQSLQYLEQVRQHLSRLPSIDPNTRTLLLTGFPNVGKSSFMNKVTRADVEVQPYAFTTKSLYVGHTDYQYLRWQVVDTPGILDHALEERNTIEMQAITALAHLRAAVLYVMDISEQCNKSLAEQIELYNSIKPLFTNKPIIICLNKVDIMKMEELSDEKKELFKQFEEDGVPIIPMSNLSEEGVMKVKSEACDRLLAQRVEVKLKNAKKMDEVVNRLHIAMPKPRDDKERPPFIPEAVKKKMNSMQVDSSDRKLQKHLEQELLEEYKFDDKALY-FVKDDEKYDIIPEIINGKNIADYIDEDIFEKLEQLEKEEELKEAAGVYDSDEEEENSEDEEIRKTAELIRKEKKIRLQEHRLKKGQASNGPVLPRKASIRLENFGRSRKRKSEEAMELDGDVEMNSDGESKPRSRSAVKKIVKKRKLEKSEARSQSAAAHRSKSLN-TPRDKSGIKNPEDREKAKKKARLSQRKMNYMGKAGESDRHIHEKMPKHLFSGKRKQGKTDRR 646
            MA YNFKKI V+P++KDFID+ LSKTQRKTPTVIHK YQI RIR FY++K+K+TQQNYHD+L+QI+TDFP+++DIHPFYADLMN+LYDKDHYKLALGQIN A++L+DNVAKDY RLMKYGDS+YRCKQLK+AALGRMCT+++RQ QSL+YLEQVRQHLSRLP+IDPNTRTLLL G+PNVGKSSF+NKVTRADV+VQPYAFTTKSL+VGH DY+YLRWQVVDTPGILDH LE+RNTIEMQAITALAHLRAAVLYVMD+SEQC   L EQ+EL+ +I+PLF NKP+I+  NK D+ ++ ELS++ +++F   + +G P+I  S L+EEGV+KVK+EACDRLLA RVE K+K   K++EV+NRLH+A+P  RDDKERPPFIPE V  +   M+ + S +K ++ LE E+ ++Y  D +  +  +   EK+D IPEI  G NIADYID  I +KLE+LEKEEEL+ AAG YDS  E E+ E  EIR+ A+ IR++KK+++ E + K  Q   GP +PR A          R    +E   L  D++   D     ++R + + I +KRK E S   S  A   RS S + TPRD SG+++ +  +KAK   + +Q+KMN +GK GE+DRH+ +  PKHL SGKRK GK DRR
Sbjct:    1 MAHYNFKKITVVPSAKDFIDLTLSKTQRKTPTVIHKHYQIHRIRHFYMRKVKFTQQNYHDRLSQILTDFPKLDDIHPFYADLMNILYDKDHYKLALGQINIAKNLVDNVAKDYVRLMKYGDSLYRCKQLKRAALGRMCTVIKRQKQSLEYLEQVRQHLSRLPTIDPNTRTLLLCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALAHLRAAVLYVMDLSEQCGHGLREQLELFQNIRPLFINKPLIVVANKCDVKRIAELSEDDQKIFTDLQSEGFPVIETSTLTEEGVIKVKTEACDRLLAHRVETKMK-GNKVNEVLNRLHLAIPTRRDDKERPPFIPEGVVARRKRMETEESRKKRERDLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQLAKQIREKKKLKILESKEKNTQ---GPRMPRTAK------KVQRTVLEKEMRSLGVDMDDKDDAHYAVQARRS-RSITRKRKREDSAPPSSVA---RSGSCSRTPRDVSGLRDVKMVKKAKTMMKNAQKKMNRLGKKGEADRHVFDMKPKHLLSGKRKAGKKDRR 634

The following BLAST results are available for this feature:

BLAST of TCONS_00026134-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00026134-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NOG1	0.000e+0	60.80	Nucleolar GTP-binding protein 1 OS=Homo sapiens GN...	[more]

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TCONS_00026134-protein (polypeptide) - C. hemisphaerica