TCONS_00026243-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026243-protein
Unique NameTCONS_00026243-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1141

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026243-protein ID=TCONS_00026243-protein|Name=TCONS_00026243-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1141bp
MNVAATRDFIIDNDRLLKINFNMPTHANPLDWYCTSPLPDVTITAKDAPT
KECKTTGDPYITTFDGKWFRHYKVGDYILVKSGARVFEVHTRVFECHVSV
SCNCGVAAREGDDVMVVDMCQTGKAPIVKFASTVEPQQGSRIERLPGGKK
FILNFPSGARVTFEYKNANIFADIIVSLPPDDYQNTRGLCGTWNGNKNDD
FTSASGHVVDLHHSGNRERMDIFTESYRFKDFGRESLFYYQGEKEGRCNS
TRIPTYCSCEGDGNYQTDDSKITCDNSGLANRPKYQTKGKKPAELIFPGQ
GCGKRRRRRRSIEDHGRNVIIMPDEDPASSIYDFNPPQITTPPPTFPTSS
GITQQQAEQSCNRALKESKSGKICLQVIPTLDITPFMQQCIDDTKVLDDS
RTSIISAVAAMMEECEEETLRNVTLWTADDNGNLQPPQAVGDALCPSDCS
GNGGCVNSTCVCNAGFLSVDCSIKEGDQPVLERVASDGLCDIRKQDCLRA
RVIGQNYVESDKLACGTKKLKVDGLILEGRSTSNMLSSKSDLLSFRDLSC
EIPEQHLPLVDLDFSPVRPGRPVGGVSIQLSNDGETFSNESSNYIAYDSK
CVECNSTTDCRWKVDSCRVNNYCIAVGEPNFEDWCQICRGNNTFMERTDN
VAPIFRPRSTQKAFHDHTLRFTVPVTDPEQKILKLNFVGRTPDNMEISSA
GVITWTAAKENKTYNVRIRATDICGTFSEATYMFESVFCPCEKLNGAKCG
AYPSVNCQCPKGCMGKNCTQAIKGEECTIRTEKERIPPKKSYFHLECQSN
GLKAAFNLSHLERHGLPYIVRFKGEGHDCKPLNSTYGNLYGDGKLWIAAN
YSDCGIKAYEEGGKIAFEQTIVVEYGAKMDSSLIQRQFFDTYNATCLIER
NITRQWNMSVAKRRTINSEEDDESNFGFDFKTLKAGTKAWTGLVYVGEKM
DFDLSLNGVSSSIKTSPQDCYATRLDGTGRYDLIKNKCSVGGETGVTITS
TPQDTSHFSWEMEAFRYFGDSDGIIITCRILICRNRPIGQLTDECRRCGQ
RPFPLRRKRDAANEDESNVLTDKSVKSLPIFIAVRDAPDKAALKESGRKL
SSNDLGATETTALIVIAGLVGSVLCVAIAKKVFFNNPPTKE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014755XLOC_014755Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026243TCONS_00026243Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001846VWF_type-D
IPR001507ZP_dom
IPR013783Ig-like_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001846von Willebrand factor, type D domainSMARTSM00216VWD_2coord: 41..206
e-value: 4.0E-16
score: 69.6
IPR001846von Willebrand factor, type D domainPFAMPF00094VWDcoord: 53..206
e-value: 2.8E-14
score: 53.6
IPR001846von Willebrand factor, type D domainPROSITEPS51233VWFDcoord: 52..210
score: 17.821
IPR001507Zona pellucida domainSMARTSM00241zp_4coord: 796..1051
e-value: 3.7E-4
score: -25.1
IPR001507Zona pellucida domainPROSITEPS51034ZP_2coord: 796..1052
score: 19.217
NoneNo IPR availableGENE3D2.60.40.1510coord: 84..472
e-value: 1.7E-5
score: 24.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 642..735
e-value: 4.7E-9
score: 36.3

Blast
BLAST of TCONS_00026243-protein vs. Swiss-Prot (Human)
Match: VWDE (von Willebrand factor D and EGF domain-containing protein OS=Homo sapiens GN=VWDE PE=2 SV=4)

HSP 1 Score: 133.65 bits (335), Expect = 1.995e-31
Identity = 113/447 (25.28%), Postives = 185/447 (41.39%), Query Frame = 0
Query:  344 PTFPTSSGITQQQAEQSCNRALKESKSGKICLQVIPTLDITPFMQQCIDDTKVLDDSRTSIISAVAAMMEECEEETLRNVTLWTADDNGNLQPPQAVGDALCPSDCSGNGGCVNSTCVCNAGFLSVDCSIKEGDQPVLERVASDGLCDIRKQDCLRARVIGQNYVESDKLACGTKKLKVDGLILEGRSTSNMLSSKSDLLSFRDLSCEIPEQHLPLVDLDFSPVRPGRPVGGVSIQLSNDGETFSNESSNYIAYDSKCVECN--STTDCRWKVDSCRVNNYCIAVGEPNFEDWCQICR---GNNTFMERTDNVAPIFRPRSTQ-KAFHDHTLRFTVPVTDPEQKILKLNFVGRTPDNMEISSAGVITWTAAKENKTYNVRIRATDICGTFSEATYMFESVFCPCEKLNGAKC----------GAYPSVNCQCPKGCMGKNCTQAIKG 774
            P++PT SG+T+      C   L  S  G++CL  +    +   ++ C+ D  +L D  +   + VA +  ECE+  +      T +   +++   +V    CP+ CSGNG C+   C C+  F S DCS      P +  + + G CD++K +C+  RV G+ + E   + C   KL+ +            + +++   + R + C++P     +   D   +  G+P G   +++SNDG  FSN     I YD  C  C       C  K + C ++  C   G+ N    C ICR      T+    +N  P+ +    + + F+     +     DPE   +    +   P+   +SSAG+  W       T  + +R  D C   +E     E     C+ LNG  C          G Y    C C  G  G  C   I G
Sbjct:  793 PSWPTPSGLTEYSTLTLCQETLANSSIGRLCLAFLGK-RLDSVIEMCVKDV-LLKDDLSWAEAGVALLENECEKRIVEEGKYNTEEYGTSIEDILSV--LKCPNLCSGNGQCMEWGCACSPSFSSYDCSDSYDKAPEITELGNAGFCDVQKYNCMMVRVFGKGFKELPSIKCEVTKLQYNS---SEWMPGEPIYTQTVFHNSRAVDCQLPTD---VQQFDTMDLVGGKPTGKWQLKVSNDGYKFSNPKITVI-YDGACQVCGLYKNDSCTIKENVCIIDGLCYVEGDKNPTSPCLICRPKISRFTWSFLENNQPPVIQALQDKLQTFYGENFEYQFVAFDPEGSDIHFT-LDSGPEGASVSSAGLFMWKTDLLT-TQQITVRLNDDCD--AETRVTIEVTVKSCDCLNGGSCVSDRNFSPGSGVYL---CVCLPGFHGSLCEVDISG 1221          

HSP 2 Score: 121.709 bits (304), Expect = 1.089e-27
Identity = 75/212 (35.38%), Postives = 111/212 (52.36%), Query Frame = 0
Query:    5 ATRDFIIDNDRLLKINFNMPTHANPLDWYCTSPLPD-VTITAKDAPTKECKTTGDPYITTFDGKWFRHYKVGDYILVKSGARVFEVHTRVFEC---HVSVSCNCGVAAREGDDVMVVDMC--QTGKAPIVKFASTVEPQQGSRIERLPGGKKFILNFPSGARVTFEYKNANIFADIIVSLPPDDYQNTRGLCGTWNGNKNDDFTSASGHVVD 210
            A  DF  D DR+  I    P       W   + +PD + I  KD PT  C T  DP+I TFDG+ + ++K G ++L KS +R FEVH R ++C   H  VSCNCG  A+EG D++  DMC  Q  ++    F  + +  +  +I     G+K  + F SGA +  +     +   + +  P  DY+NT GLCGT++ N  +DF   +G  +D
Sbjct:  379 AVTDFSRDGDRVSNIVVQ-PIVNEDFLW--NNYIPDSIQIKVKDVPTAYCYTFTDPHIITFDGRVYDNFKTGTFVLYKSMSRDFEVHVRQWDCRSLHYPVSCNCGFVAQEGGDIVTFDMCNGQLRESQPYLFIKSQDVTRNIKISESYLGRKVTIWFSSGAFIRADLGEWGM--SLTIRAPSVDYRNTLGLCGTFDENPENDFHDKNGMQID 585          
The following BLAST results are available for this feature:
BLAST of TCONS_00026243-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VWDE1.995e-3125.28von Willebrand factor D and EGF domain-containing ... [more]
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