TCONS_00026431-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026431-protein
Unique NameTCONS_00026431-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length346

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026431-protein ID=TCONS_00026431-protein|Name=TCONS_00026431-protein|organism=Clytia hemisphaerica|type=polypeptide|length=346bp
MSNSKSSLSRTPSTVSSVEYGNDQENCYPSDVELGPIITALKLGTSMSRF
KVKGNRPEQKTFQLDLEEFKISWFRAGTGREEGKIFIEEIKEIRSGVTSK
DFVNFLRKIEDPNSCIVIVYGSCFNLKTLSCMAQNVSERNYWMKGLVYLK
FRNQYVPTVALTQRWLCREWSGLPKNNQQKMSMREYKMFLQRANIKLSNN
KVRDTYQKVLTPRSSGIDATGFCQAYYNLLHQSSIAEKYEQYFRKVNDEL
VMFMSDFQRFLTDVQGDYRAQHDPQYARSIMVQCIPDESLFKGSEPYVDM
KQFINYLFSPMNSAFNNNTAYDESNKVYQDMTKPLNNYWIASSHNT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014840XLOC_014840Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026431TCONS_00026431Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017946PLC-like_Pdiesterase_TIM-brl
IPR011993PH_dom-like
IPR000909PLipase_C_PInositol-sp_X_dom
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0008081phosphoric diester hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006629 lipid metabolic process
molecular_function GO:0008081 phosphoric diester hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domainGENE3D3.20.20.190coord: 325..346
e-value: 9.2E-8
score: 31.0
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domainSUPERFAMILY51695PLC-like phosphodiesterasescoord: 329..346
NoneNo IPR availableGENE3D1.10.238.10coord: 164..240
e-value: 0.0011
score: 18.5
NoneNo IPR availableGENE3D1.10.238.10coord: 241..320
e-value: 7.0E-9
score: 35.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
IPR011993PH domain-likeGENE3D2.30.29.30coord: 44..152
e-value: 2.0E-13
score: 50.0
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 36..147
IPR000909Phosphatidylinositol-specific phospholipase C, X domainPROSITEPS50007PIPLC_X_DOMAINcoord: 329..346
score: 9.92
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 162..318

Blast
[Close]
BLAST of TCONS_00026431-protein vs. Swiss-Prot (Human)
Match: PLCG1 (1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Homo sapiens GN=PLCG1 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.492e-44
Identity = 119/334 (35.63%), Postives = 177/334 (52.99%), Query Frame = 0 
Query:   29 PSDVELGPIITALKLGTSMSRF-KVKGNRPEQKTFQLDLEEFKISWFRAGTGREEGKIFIEEIKEIRSGVTSKDFVNFLRKIEDP------NSCIVIVYGSCFNLKTLSCMAQNVSERNYWMKGLVYLKFRNQYVPTVALTQRWLCREWSGLPKNNQQKMSMREYKMFLQRANIKLSNNKVRDTYQKVLTPRSSGIDATGFCQAYYNLLHQSSIAEKYEQYFRKVN-------DELV-MFMSDFQRFLTDVQGDYRAQHDPQYARSIMVQCIPDESLFKGSEPYVDMKQFINYLFSPMNSAFNNNTAYDESNKVYQD-MTKPLNNYWIASSHNT 346
            PSD E+  +  +L++GT M+ F   K  RPE+KTFQ+ LE  +I+W R G  + EG I I EIKEIR G TS+DF    R  EDP      + C VI+YG  F LKTLS  A +  E N W+KGL +L       PT    +RWL +++  + +N + ++S ++ K  L + N ++ N +        L  RS  I    F Q Y +L++  S  +  +  F + +        EL  + + +FQ+FL D QG+  A  D    +  M+  + D  L +  EPY  + +F+ +LFS  NS +N+       + V  D M  PL++YWI+SSHNT
Sbjct:   17 PSDAEVLHLCRSLEVGTVMTLFYSKKSQRPERKTFQVKLETRQITWSR-GADKIEGAIDIREIKEIRPGKTSRDFD---RYQEDPAFRPDQSHCFVILYGMEFRLKTLSLQATSEDEVNMWIKGLTWLMEDTLQAPTPLQIERWLRKQFYSVDRNREDRISAKDLKNMLSQVNYRVPNMRFLRERLTDLEQRSGDITYGQFAQLYRSLMY--SAQKTMDLPFLEASTLRAGERPELCRVSLPEFQQFLLDYQGELWAV-DRLQVQEFMLSFLRD-PLREIEEPYFFLDEFVTFLFSKENSVWNSQL-----DAVCPDTMNNPLSHYWISSSHNT 337
The following BLAST results are available for this feature:
BLAST of TCONS_00026431-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLCG16.492e-4435.631-phosphatidylinositol 4,5-bisphosphate phosphodie... [more]
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