TCONS_00026792-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026792-protein
Unique NameTCONS_00026792-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length266

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026792-protein ID=TCONS_00026792-protein|Name=TCONS_00026792-protein|organism=Clytia hemisphaerica|type=polypeptide|length=266bp
NSPTSRIIGGQDSSVGRWPWQVAVKEENAGPGRGSFCGGTLISPKWVLTA
AHCFKTRTTASVVLGEVDFRILEPSEQRRNVEEIHKHPLYNPDVSQDYDY
ALLELEEAVVITRNVRPICLPRARRFRDTTFDGKTCTITGWGAVDVTPPD
SPDGEPTIEGTPTLQEAEVEVITREQCSQSWNLSPRMVCAGPTRDVGTCF
GDSGGPLQCRDGRIWYLWGVTSFGSEFCREKPGVFASLKNSGEDRNEILS
WIDEEINGSGPVLPGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015050XLOC_015050Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026792TCONS_00026792Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR033116TRYPSIN_SER
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 95..109
score: 32.47
coord: 196..208
score: 59.61
coord: 38..53
score: 65.53
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 6..252
e-value: 2.2E-73
score: 259.8
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 7..239
e-value: 8.7E-57
score: 192.4
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 7..257
score: 32.664
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 7..254
e-value: 2.31101E-79
score: 241.026
NoneNo IPR availableGENE3D2.40.10.10coord: 6..17
e-value: 2.2E-4
score: 20.4
NoneNo IPR availableGENE3D2.40.10.10coord: 44..112
e-value: 1.0E-30
score: 105.2
NoneNo IPR availableGENE3D2.40.10.10coord: 113..237
e-value: 1.3E-34
score: 118.6
NoneNo IPR availableGENE3D2.40.10.10coord: 18..43
e-value: 1.9E-20
score: 72.2
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 48..53
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 197..208
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 3..257

Blast
[Close]
BLAST of TCONS_00026792-protein vs. Swiss-Prot (Human)
Match: CTRB1 (Chymotrypsinogen B OS=Homo sapiens GN=CTRB1 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 2.826e-40
Identity = 86/238 (36.13%), Postives = 129/238 (54.20%), Query Frame = 0 
Query:    2 SPTSRIIGGQDSSVGRWPWQVAVKEENAGPGRGSFCGGTLISPKWVLTAAHCFKTRTTASVVLGEVDFRILEPSEQRRNVEEIHKHPLYNPDVSQDYDYALLELEEAVVITRNVRPICLPRARRFRDTTFDGKTCTITGWGAVDVTPPDSPDGEPTIEGTPTLQEAEVEVITREQCSQSWN--LSPRMVCAGPTRDVGTCFGDSGGPLQCRDGRIWYLWGVTSFGSEFCR-EKPGVFA 236
            S  SRI+ G+D+  G WPWQV+++++        FCGG+LIS  WV+TAAHC   RT+  VV GE D    E + Q   + ++ K+P ++  ++ + D  LL+L      ++ V  +CLP A    D    G  C  TGWG        +PD          LQ+A + +++  +C +SW   ++  M+CAG +  V +C GDSGGPL C+    W L G+ S+GS+ C    PGV+A
Sbjct:   29 SGLSRIVNGEDAVPGSWPWQVSLQDKTGF----HFCGGSLISEDWVVTAAHC-GVRTSDVVVAGEFDQGSDEENIQVLKIAKVFKNPKFSI-LTVNNDITLLKLATPARFSQTVSAVCLPSAD---DDFPAGTLCATTGWGKTKYNANKTPD---------KLQQAALPLLSNAECKKSWGRRITDVMICAGAS-GVSSCMGDSGGPLVCQKDGAWTLVGIVSWGSDTCSTSSPGVYA 247
The following BLAST results are available for this feature:
BLAST of TCONS_00026792-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTRB12.826e-4036.13Chymotrypsinogen B OS=Homo sapiens GN=CTRB1 PE=2 S... [more]
back to top