TCONS_00026893-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00026893-protein
Unique Name	TCONS_00026893-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	551

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00026893-protein ID=TCONS_00026893-protein|Name=TCONS_00026893-protein|organism=Clytia hemisphaerica|type=polypeptide|length=551bp
MSSLIMHGRREGQVKNGGLASELPRIGLMAQGINPNEVAVFQPKDWQRIQ
NNLARYNEASEKAEQKRRDRENLHAASKELVKHWENTIEGQRLKKLQARK
LREEQEEEERKKIDIEEAKIQAQKRKEAIERAKQQQYYETDRVKGFHGAL
LLTEVLKERDAQIAFKNSRQDFQKERENHLIKLQKQNLDDLLKAEQEKLQ
ETRQRSTEVANFQKLQVKDCDNIKQLEKSEDKEEGKTLKDQFDAYCNTKK
TIANKHRQKKKALQEFYKNEIQLKREKEQEDLLKEEAENEKIKKFVKAKK
KMANMRKEKEQQIFDNFQEHTEMMRSKLQDSMQQQIDDEDDRIAKAVAER
EQKRMEELNRKQQKQKDSLQAMKNHRIQMMTDSNHQQQENKAKDQMLLQQ
RIKQDNKFFEDKKKERKEKRQVASKLQSTHKDQMFQKEDKSAKERNEQLE
VDKNNKELLVKEEEIFQNYADKVITNATDNGRNPFPLIKAAREGPGGGRG
PKFEGNAGLRPSYIVADATGVQLPHYLKDESVGNRVYGHVCKSGTRLGFT
W

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_015112	XLOC_015112	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00026893	TCONS_00026893	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 268..293
None	No IPR available	COILS	Coil	Coil	coord: 88..135
None	No IPR available	COILS	Coil	Coil	coord: 46..76
None	No IPR available	COILS	Coil	Coil	coord: 185..205
None	No IPR available	COILS	Coil	Coil	coord: 329..375
None	No IPR available	PFAM	PF13868	TPH	coord: 139..478 e-value: 4.4E-18 score: 64.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 406..448

Blast

[Close]

BLAST of TCONS_00026893-protein vs. Swiss-Prot (Human)
Match: CC173 (Coiled-coil domain-containing protein 173 OS=Homo sapiens GN=CCDC173 PE=2 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 1.034e-71
Identity = 181/557 (32.50%), Postives = 318/557 (57.09%), Query Frame = 0

Query:    4 LIMHGRREGQVKNG-----GLASELPRIGLMAQGINPNEVAVFQPKDWQRIQNNLARYNEASEKAEQKRRDRENLHAASKELVKHWENTIEGQRLKKLQARKLREEQEEEERKKIDIEEAKIQAQKRKEAIERAKQQQYYETDRVKGFHGALLLTEVLKERDAQIAFKNSRQDFQKERENHLIKLQKQNLDDLLKAEQEKLQETRQRSTEVANFQKLQVKDCDNIKQLEKSEDKEEGKTLKDQFDAY-CNTKKTIANKHRQKKKALQEFYKNEIQLKREKEQEDLLKEEAENEKIKKFVKAKKKMANMRKEKEQQIFDNFQEHTEMMRSKLQDSMQQQIDDEDDRIAKAVAEREQKRMEELNRKQQKQKDSLQAMKNHRIQMMTDSNHQQQENK--AKDQMLLQQRIKQDNKFFEDKKKERKEKRQVASKLQSTHKDQMFQKEDKSAKERNEQLEVDKNNKELLVKEEEIFQNYADKVI-TNATDNGRNPFPLIKAAREGPGGGRGPKFEGNAGLRPSYIVADATGVQLPHYLKDESVGNRVYGHVCKSGTRLGFTW 551
            L+  GRR G+ K           ++  + L+   ++  +V +    +W+RIQ++L R    +     +R+ ++ +H  S+E+VKHW NT  G + +KL+A+K R+E+ E ER+ +D+EE   +  KRK+AIE AKQ Q+Y+T+RVK FH  LLL+ V+KERDAQI F+ S+    K+ E  L    K N++   K EQEK ++  +    +A     Q+K+ +  ++  K  ++++ + +K Q   Y    +K +  K  +  ++ + F ++ +Q K   +  +  ++E E+EK++KF+KAKK++  M KEKE +     ++  E + + L + +++++D+ED  IA+ +AE E +  +    K +K K  L+ +  +R  +M +   ++++ K  AK+Q+L    +K D  F+E +K+++ +  +   ++Q  H  QM + +  + + +  +L+  +  + L+ ++E+ FQ+YA +VI   +    +  +PL+KA +EGPGGGRGP F    GLRPSY   D TGVQLP Y    S G +   +  KS  RLGFTW
Sbjct:    8 LVRFGRRCGRAKESTEIRNSEEDQVLYLPLLPSKVDLQQVTIIPHDEWKRIQDSLDRLTREAACLRAERKAKKEMHLRSQEVVKHWTNTYAGMKEQKLEAKKKRDEEIEAERQILDLEEEIYKQGKRKKAIENAKQYQFYQTERVKNFHSGLLLSRVMKERDAQIEFRKSKIKSDKKWEEQL----KLNIEKAFKEEQEKAEKRHRERVALAKDHLKQIKEHEEEEERRKKYEEKDAEEIKRQNALYEIEMRKKLEKKREEMHESRRRFLEH-MQDKHIIKAVEQQQQEEEDEKMRKFIKAKKRLIQMGKEKEAETHRLMEKRRERIHNFLSELLKEKLDNEDMIIARDIAEAEAEWEKREREKDEKNKAELKTIAEYRAIVMKNKEEEERQRKIEAKEQLLAV--MKADQIFWEHEKEKKCKADKEHQEVQDAHIQQMAKNKFNAKQAKQAELDYCRLTEALVAEKEKEFQDYAREVIELESETTNKYIYPLVKAVQEGPGGGRGPVFVDRGGLRPSYQANDVTGVQLPFY---NSQGPKY--NFQKSKRRLGFTW 552

The following BLAST results are available for this feature:

BLAST of TCONS_00026893-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00026893-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CC173	1.034e-71	32.50	Coiled-coil domain-containing protein 173 OS=Homo ...	[more]

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TCONS_00026893-protein (polypeptide) - C. hemisphaerica