TCONS_00026974-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026974-protein
Unique NameTCONS_00026974-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length722

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026974-protein ID=TCONS_00026974-protein|Name=TCONS_00026974-protein|organism=Clytia hemisphaerica|type=polypeptide|length=722bp
MLALNLSRVDYLQVGVTSNKCMSVIPTAGGSSSKPTTQRIVVGDYEGVVT
CFNIKKHVPNISFKTLPLNNKILRLCMGARAGPLMEKVYVCSGNEVYGFN
KKGKGFLKFDSNLTESIQTMYADNLDLYLCGKYICNHYHDCIDSNYYLSP
DLINDIVVLPESGGHKPMPILACQDRVLRALNGSDLYYEVEIPGSPSVAV
LGSQAENGADSVVYGTADGKIGLVQLNASAPEHVWEIGNEKQSGDVLSLD
LYDVSSNGTKDLLVGRADGVIEVYGFDEGSNPFQHYKYTLSESITAVSGG
SVCAPGYQEVAVSTYTGWILGLTSEPQQRQTGMQGSNTNDPVTAEIKQKI
TDLNAEIEELQGLVLKERDKYQQTANSKTAVSAVPMFEINDRFQLNHGDA
SYTLSIEVLMPIDIILLQSDVPVDLLDVEKNSAVVSYSSCDPESGNFLLA
TYRCQANTTRLELKIRTIEGQHGHLQAYITPRLQPKTCIMKQYQIKPLSL
HQRSHVFDQDRPHNELKLSGQFSQAEIHSWVYHALPEVPERVPMENEISF
YFVSTFLDTQLECRYSKGQATFRSDNISTISILKDVLSKEATKRKMNLNI
SCDLNEDSIPNVLYRIHPKLEYQLLLAKRVQLIDGLKELETYEGNVDFLT
EEYREILENADILQAEFKKQPCHLERLYGMITDLYIDRHKFKGQNVKNKV
SQLISILDNYDLDSLLEFFQES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015142XLOC_015142Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026974TCONS_00026974Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 639..666
NoneNo IPR availableCOILSCoilCoilcoord: 343..370
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 13..478
e-value: 5.5E-7
score: 28.3
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 142..319
coord: 35..112

Blast
[Close]
BLAST of TCONS_00026974-protein vs. Swiss-Prot (Human)
Match: BBS7 (Bardet-Biedl syndrome 7 protein OS=Homo sapiens GN=BBS7 PE=1 SV=2)

HSP 1 Score: 816.224 bits (2107), Expect = 0.000e+0
Identity = 413/721 (57.28%), Postives = 525/721 (72.82%), Query Frame = 0 
Query:    2 LALNLSRVDYLQVGVTSNKCMSVIPTAGGSSSKPTTQRIVVGDYEGVVTCFNIKKHVPNISFKTLPLNNKILRLCMGARAGPLMEKVYVCSGNEVYGFNKKGKGFLKFDSNLTESIQTMYADNLDLYLCGKYICNHYHDCIDSNYYLSPDLINDIVVLPESGGHKPMPILACQDRVLRALNGSDLYYEVEIPGSPSVAVL--GSQAENGADSVVYGTADGKIGLVQLNASAPEHVWEIGNEKQSGDVLSLDLYDVSSNGTKDLLVGRADGVIEVYGFDEGSNPFQHYKYTLSESITAVSGGSVCAPGYQEVAVSTYTGWILGLTSEPQQRQTGMQGSNTNDPVTAEIKQKITDLNAEIEELQGLVLKERDKYQQTANSKTAVSAVPMFEINDRFQLNHGDASYTLSIEVLMPIDIILLQSDVPVDLLDVEKNSAVVSYSSCDPESG-NFLLATYRCQANTTRLELKIRTIEGQHGHLQAYITPRLQPKTCIMKQYQIKPLSLHQRSHVFDQDRPHNELKLSGQFSQAEIHSWVYHALPEVPERVPMENEISFYFVSTFLDTQLECRYSKGQATFRSDNISTISILKDVLSKEATKRKMNLNISCDLNEDSIPNVLYRIHPKLEYQLLLAKRVQLIDGLKELETYEGNVDFLTEEYREILENADILQAEFKKQPCHLERLYGMITDLYIDRHKFKGQNVKNKVSQLISILDNYDLDSLLEFF 719
            + L L+R+DYLQVGVTS K M +IP    +S    TQ++V+GD++GVV CF +KK      FKTLP   KI RL +G       EK+++ + +E+ GF K+GK FL F++NLTESI+ M+    DL+L   YI NHY DC D +YYLS D IND++ LP     +  P+LACQDRVLR L GSD+ Y VE+PG P+V  L  G+  ++G D +++GT+DGK+ L+Q+  S P   WEI NEK+ G +L +D +D+  +G KDLLVGR DG++EVY FD  + P   +   LSES+T++ GG V    Y E+ VSTY+GW+ GLT+EP  +++G         +  E++ KI+ L  E+E LQ  VL+ER+ YQQ++ S  A SAVP F IND+F LN  DASY+L +EV   ID +L+QSDVP+DLLDV+KNSAVVS+SSCD ES  NFLLATYRCQA+TTRLELKIR+IEGQ+G LQAY+TPR+QPKTC ++QY IKPLSLHQR+H  D DRP N L L+GQFS AE+HSWV   LPEVPE+ P    ++FYF +TFLDTQLE  Y KG+  F+SDNISTISILKDVLSKEATKRK+NLNIS ++NE S+ + L  IHPKLEYQLLLAK+VQLID LKEL+ +EGN +FL  EY  ILE AD LQ E+KKQP HLERLYGMITDL+ID+ KFKG NVK KV  L+ ILD+YD ++L+ FF
Sbjct:    1 MDLILNRMDYLQVGVTSQKTMKLIP----ASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKTLP-GPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSDLFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDVMYAVEVPGPPTVLALHNGNGGDSGED-LLFGTSDGKLALIQITTSKPVRKWEIQNEKKRGGILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQMLSESVTSIQGGCVGKDSYDEIVVSTYSGWVTGLTTEPIHKESG---PGEELKINQEMQNKISSLRNELEHLQYKVLQERENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAIDNVLIQSDVPIDLLDVDKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQYGTLQAYVTPRIQPKTCQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFAEVHSWVVFCLPEVPEKPPAGECVTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEATKRKINLNISYEINEVSVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIPEYHCILEEADHLQEEYKKQPAHLERLYGMITDLFIDKFKFKGTNVKTKVPLLLEILDSYDQNALISFF 712
The following BLAST results are available for this feature:
BLAST of TCONS_00026974-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BBS70.000e+057.28Bardet-Biedl syndrome 7 protein OS=Homo sapiens GN... [more]
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