|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00027135-protein ID=TCONS_00027135-protein|Name=TCONS_00027135-protein|organism=Clytia hemisphaerica|type=polypeptide|length=654bp
MGLIDQIEFYTDWVNNEFRLSWKDHYVEDLIEDFSSGVYLALLINALFDE
DIPILHDPPGTSYERQQNVQFCFPILCEEGVNLTGVTVKGISEGDVDIII
SLCDAIKRRKGVGFRRWRSWDIPQESFLDLGSVSYRDDIYEQQQINDFRY
SNNLRKNASHSVFHNQTKRNNRAAFNEPLSNRDLIVRQSEFTLLGNQSND
GEYVNKDVDWLYSKNNSLLDQSDQRNETNTHSDWMKGSNNRKVEFEQSAE
DVEGQTLYDEISFLANESQRNPFMDGHMMYQKEDIELFDWISKLLNVPVS
DYGSFADGIVIFQLLNKIIPNCVSSKVFYSLPKTERIQLLLETACHELYL
TTHLTALDVIQQRNFSHFRIFLTYLKSCVPSQSHRENNQKKFSLKELTTE
LDIKYLESSGYLKVDSTETSRSSSSPSKGPLKRDKLENVSSKSVQAKVNE
EKHQKAIRKKILRTIHTEYVSPTWSKILNEELQLRASRNESRLSSGYLTP
VPAPESGASSKRDNRENSQKTVKREEKIPARSFLEEPTISQVSPIYNPDT
ERITKYDNEIAAIFDGSDDDEESTLHSSVAAARTPTTEKSVGNINSKTSE
VTDTDARSKTSLVAAFAGNSKKKNKFLEITDVVRSMSRSPSGSRPASRLL
TETS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001715 | CH-domain |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001715 | Calponin homology domain | GENE3D | 1.10.418.10 | | coord: 280..396
e-value: 5.4E-6
score: 25.8 |
| IPR001715 | Calponin homology domain | GENE3D | 1.10.418.10 | | coord: 3..113
e-value: 9.5E-14
score: 50.8 |
| IPR001715 | Calponin homology domain | PFAM | PF00307 | CH | coord: 284..373
e-value: 8.5E-5
score: 22.6
coord: 10..103
e-value: 1.1E-6
score: 28.7 |
| IPR001715 | Calponin homology domain | PROSITE | PS50021 | CH | coord: 4..111
score: 10.278 |
| IPR001715 | Calponin homology domain | PROSITE | PS50021 | CH | coord: 281..379
score: 10.378 |
| IPR001715 | Calponin homology domain | SUPERFAMILY | 47576 | Calponin-homology domain, CH-domain | coord: 7..123
coord: 279..371 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 567..606 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 416..455 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 490..528 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 634..654 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 221..240 |
Blast
The following BLAST results are available for this feature:
|
