TCONS_00027185-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027185-protein
Unique NameTCONS_00027185-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length179

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027185-protein ID=TCONS_00027185-protein|Name=TCONS_00027185-protein|organism=Clytia hemisphaerica|type=polypeptide|length=179bp
MSLDKKTIISSVLLVLSNSLAISSIGTPSWVENNFAGTTRLGLTKICVLF
NGQDPQNEECEALKMPSYWAVTLIFIVIGICLIFLTVLLLLLSIWRTHSE
KMARIIGFLAMLFFCVACIVFPFGFYIEEIGGQAYKLPAYTQVGYSYYLF
CGAVSLLTAAVTLCNLDVIRENFNHRMNR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015285XLOC_015285Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027185TCONS_00027185Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019372Lipome_HGMIC_fus_partner-like
IPR020846MFS_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1070.10coord: 50..179
e-value: 2.0E-8
score: 32.8
IPR019372Lipoma HMGIC fusion partner-like proteinPFAMPF10242L_HMGIC_fplcoord: 20..154
e-value: 1.3E-8
score: 35.2
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 65..164

Blast
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BLAST of TCONS_00027185-protein vs. Swiss-Prot (Human)
Match: CP052 (Uncharacterized protein C16orf52 OS=Homo sapiens GN=C16orf52 PE=2 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 1.783e-36
Identity = 65/149 (43.62%), Postives = 88/149 (59.06%), Query Frame = 0 
Query:    3 LDKKTIISSVLLVLSNSLAISSIGTPSWVE-NNFAGTTRLGLTKICVLFNGQDPQNEECEALKMPSYWAVTLIFIVIGICLIFLTVLLLLLSIWRTHSEKMARIIGFLAMLFFCVACIVFPFGFYIEEIGGQAYKLPAYTQVGYSYYLF 150
            +DK TIIS  L + ++  AI+SI  P W+     AG   +GL + C   +G+D     C   ++P  W  TL FI++GI  + +T  LL+ S WR  + K AR I F  M+ FC+A ++FP GFYI E+GGQ YKLP  T VG SY LF
Sbjct:    1 MDKLTIISGCLFLAADIFAIASIANPDWINTGESAGALTVGLVRQCQTIHGRD---RTCIPPRLPPEWVTTLFFIIMGIISLTVTCGLLVASHWRREATKYARWIAFTGMILFCMAALIFPIGFYINEVGGQPYKLPNNTVVGSSYVLF 146
The following BLAST results are available for this feature:
BLAST of TCONS_00027185-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CP0521.783e-3643.62Uncharacterized protein C16orf52 OS=Homo sapiens G... [more]
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