TCONS_00027467-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027467-protein
Unique NameTCONS_00027467-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length395

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027467-protein ID=TCONS_00027467-protein|Name=TCONS_00027467-protein|organism=Clytia hemisphaerica|type=polypeptide|length=395bp
MADYYCFTYRYLGITQYTYEIAPVFLIMEKFIWELINQKVGFKDGDGMFF
PGGSLCNIAAINLARFKCCPNIKEDGVFGMKKLIIYTSEESHYSITKGAA
LCGIGTKNVVKIRTNDVTGKMIAEDLDEKIQQSIAKGEQPMMVVATAGTT
VGGAYDPINQIADVTDKYNIWLHVDGAWGGPVLLSEKYKKFMDGCHRIDS
LTWDPHKMMGLLQQCSFLVVKEKGLLQQCNSANASYLFQKDKQSYDVSWD
SGDKTFVCGRRNDILKLWMYFKAKGLKGVENDINKCFENSRYLTSKIKER
ENFSLLREPECTNVCFRYTPPRIARMPEGAEREKELTKVAPEIKKKMTEK
GSMMVAYQPLKEHVNFFRMINSNPGQTFSDMDFILDEIERLGKDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015477XLOC_015477Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027467TCONS_00027467Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015422PyrdxlP-dep_Trfase_sub2
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR002129PyrdxlP-dep_de-COase
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016831carboxy-lyase activity
GO:0030170pyridoxal phosphate binding
Vocabulary: Biological Process
TermDefinition
GO:0019752carboxylic acid metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019752 carboxylic acid metabolic process
molecular_function GO:0016831 carboxy-lyase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 262..395
e-value: 4.9E-25
score: 87.6
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 14..261
e-value: 8.7E-50
score: 168.4
IPR002129Pyridoxal phosphate-dependent decarboxylasePFAMPF00282Pyridoxal_deCcoord: 17..318
e-value: 4.7E-82
score: 275.6
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 12..395

Blast
[Close]
BLAST of TCONS_00027467-protein vs. Swiss-Prot (Human)
Match: DCE1 (Glutamate decarboxylase 1 OS=Homo sapiens GN=GAD1 PE=1 SV=1)

HSP 1 Score: 415.231 bits (1066), Expect = 1.724e-141
Identity = 203/383 (53.00%), Postives = 272/383 (71.02%), Query Frame = 0 
Query:   17 YTYEIAPVFLIMEKFIWELINQKVGF--KDGDGMFFPGGSLCNIAAINLARFKCCPNIKEDGVFGMKKLIIYTSEESHYSITKGAALCGIGTKNVVKIRTNDVTGKMIAEDLDEKIQQSIAKGEQPMMVVATAGTTVGGAYDPINQIADVTDKYNIWLHVDGAWGGPVLLSEKYKKFMDGCHRIDSLTWDPHKMMGLLQQCSFLVVKEKGLLQQCNSANASYLFQKDKQSYDVSWDSGDKTFVCGRRNDILKLWMYFKAKGLKGVENDINKCFENSRYLTSKIKERENFSLL--REPECTNVCFRYTPPRIARMPEGAEREKELTKVAPEIKKKMTEKGSMMVAYQPLKEHVNFFRMINSNPGQTFSDMDFILDEIERLGKDL 395
            +TYEIAPVF++ME+   + + + VG+  KDGDG+F PGG++ N+ +I  AR+K  P +K  G+  + KL+++TSE+SHYSI K  A  G GT NV+ I+ N+  GK+I  D + KI ++  KG  P  V ATAGTTV GA+DPI +IAD+ +KYN+WLHVD AWGG +L+S K++  ++G  R +S+TW+PHKMMG+L QCS ++VKEKG+LQ CN   A YLFQ DKQ YDVS+D+GDK   CGR  DI K W+ +KAKG  G EN INKC E + YL +KIK RE F ++   EPE TNVCF Y P  +  +P+  +R ++L KVAP+IK  M E G+ MV YQP  +  NFFRM+ SNP  T SD+DF+++EIERLG+DL
Sbjct:  214 FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE-RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQ-YDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 594
The following BLAST results are available for this feature:
BLAST of TCONS_00027467-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCE11.724e-14153.00Glutamate decarboxylase 1 OS=Homo sapiens GN=GAD1 ... [more]
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