TCONS_00027971-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027971-protein
Unique NameTCONS_00027971-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length844

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027971-protein ID=TCONS_00027971-protein|Name=TCONS_00027971-protein|organism=Clytia hemisphaerica|type=polypeptide|length=844bp
MYATHLVENLNHGLFIVIFKSLGALNWEIFSLFYFLWGSFEAAMSKLSFR
ARALDANKSLPVYHEEDVPDLPDIASVNRVVPQMPTGMEKEEESEHHLQR
AISAQQIYGGSQRLIIPTPDAILYDSDYKQLKRKNVHMPKQLIHVQAFTL
EDELPDYDADEEDEKWLQGFNKKNPDKTVDVLTFERIIDTLEKSCSSRIE
LFTLSDAQALIKKDEKIVKTFFEYWKEKRTKKGLPLAPTVSNEKKDGTAM
HDPYVAFRRRVEKMQTRKNRKNDESSYEKMLKLRRDLNRACLILEMVKHR
EERKRDLLQTTIKILESRYASKDFNNELLHQCYEMLKQRQMQQHDHKPLQ
TANNNTIREHHTETKTLKRSELLEEQKKRHKLLKQQQRAALLASASEDHS
VDTNQTQATSHSREIDKGNEGPDGKYTFRRKKGVVYHAPRYDSMGNWPWM
HPVEGGTGASQFAFSKTSMTKQCKCIGFSRRRVGRGGRINFDRAYTPYDE
YSTMNDESLVHIDNDRVPPWPHYKPQKRESSDDECENEKTYFNSFDWFKK
PDTNNDTADTRKHSHKSFTSSPTSRFCVYPYSYNRTRNFKMRKSRSSLSN
MNNRLLNSSLVSPLSKTTVNSHNWILRRSSSSSSNTNHLRITNNKKFPIS
NSRKNHLSPSRPASTAPASAIYQLNFPISTKTPTPTTPSMTNVKTESSLK
NINLINNNTILKAVVKSSAGASLLQSSLNTFVDNSGTRLIPSASFASSVS
AALLQNSISRQPLTAVQQKSLLAASQQKIIPQSTVSATTSAGGGTILQVQ
PVMNNVRTNKINNLPKGLTINHTTAVVVSNGITTQPQSIQQLAR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015827XLOC_015827Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027971TCONS_00027971Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019542Enhancer_polycomb-like_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 298..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..426
IPR019542Enhancer of polycomb-like, N-terminalPFAMPF10513EPL1coord: 50..193
e-value: 9.6E-18
score: 65.0

Blast
[Close]
BLAST of TCONS_00027971-protein vs. Swiss-Prot (Human)
Match: EPC1 (Enhancer of polycomb homolog 1 OS=Homo sapiens GN=EPC1 PE=1 SV=1)

HSP 1 Score: 390.578 bits (1002), Expect = 6.706e-123
Identity = 229/486 (47.12%), Postives = 314/486 (64.61%), Query Frame = 0 
Query:   44 MSKLSFRARALDANKSLPVYHEEDVPDLPDIASVNRVVPQMPTGMEKEEESEHHLQRAISAQQIYGGSQ-RLIIPTPDAILYDSDYKQLKRKNVHMPKQLIHVQAFTLEDELPDYDADEEDEKWLQGFNKKNPDKTVDV--LTFERIIDTLEKSCSSRIELFTLSDAQALIKKDEKIVKTFFEYWKEKRTK-KGLPLAPTVSNEKKDGTAMHDPYVAFRRRVEKMQTRKNRKNDESSYEKMLKLRRDLNRACLILEMVKHREERKRDLLQTTIKILESRYASKDFNNELLHQCYEMLKQRQ-MQQHDHKPLQTANNNTIREHH--TETKTLK-----RSELLEEQKKRHKLLK-----------QQQRAALLASASED-------HSVDTNQTQATSHSREIDKGNEGPDGKYTFRRKKGVVYHAPRYDSMGNWPWMHPVEGGTGASQFAFSKTSMTKQCKCIGFSRRRVGRGGRINFDRAYTPYD 499
            MSKLSFRARALDA+K LPV+  ED+PDL + AS+NR VPQMPTGMEKEEESEHHLQRAISAQQ+YG  +  ++IP P+A    + Y+ +      MPKQLIH+Q F+L+ E PDYD D EDE ++    KK     +D+  L FE +ID LEK   S  +  +L +A+ L+K+D+++++  +EYW +KR   +G  L P+V  EK+DG++ +DPYVAFRRR EKMQTRKNRKNDE+SYEKMLKLRRDL+RA  ILEM+K RE+ KR+LL  T++I+E RY   D+N E++    E++ QRQ M+     P+    N++  +H    + K  K     +++L+  ++K  K  K           Q   AAL    ++D        S +   +Q  S S E ++ N+ PDG + FRRK G  Y+AP  D  GNWPW  P +GG G  ++ +  T++T   +CIGF+RRRVGRGGR+  DRA++ YD
Sbjct:    1 MSKLSFRARALDASKPLPVFRCEDLPDLHEYASINRAVPQMPTGMEKEEESEHHLQRAISAQQVYGEKRDNMVIPVPEAESNIAYYESIYPGEFKMPKQLIHIQPFSLDAEQPDYDLDSEDEVFVNKLKKK-----MDICPLQFEEMIDRLEKG--SGQQPVSLQEAKLLLKEDDELIREVYEYWIKKRKNCRGPSLIPSVKQEKRDGSSTNDPYVAFRRRTEKMQTRKNRKNDEASYEKMLKLRRDLSRAVTILEMIKRREKSKRELLHLTLEIMEKRYNLGDYNGEIMS---EVMAQRQPMKPTYAIPIIPITNSSQFKHQEAMDVKEFKVNKQDKADLIRPKRKYEKKPKVLPSSAAATPQQTSPAALPVFNAKDLNQYDFPSSDEEPLSQVLSGSSEAEEDND-PDGPFAFRRKAGCQYYAPHLDQTGNWPWTSPKDGGLGDVRYRYCLTTLTVPQRCIGFARRRVGRGGRVLLDRAHSDYD 475
The following BLAST results are available for this feature:
BLAST of TCONS_00027971-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EPC16.706e-12347.12Enhancer of polycomb homolog 1 OS=Homo sapiens GN=... [more]
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