TCONS_00028099-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028099-protein
Unique NameTCONS_00028099-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length240

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028099-protein ID=TCONS_00028099-protein|Name=TCONS_00028099-protein|organism=Clytia hemisphaerica|type=polypeptide|length=240bp
LTVAKQGKTLGAYKLSRYAFDKLQTMRVPQRFQQNIDVGSMTIRSKPFQD
NQDLLSMCYRCSTTNPLLNNKGNQCINCSQPFIHSFIGFEVLPLVEFILE
DGISDEEAVRLIKMDSLSGSSPRDHWQESGNDQSQSMRLENDTGGLDEDD
DPFTSKLMSFDQGGGQYQPVVIGQNTLKKLSRTTVFIKEWQAPLRYQYYR
NLIPEISITMCKSCWRMYHAEDFELLMLQNGCCPFCRGKQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015898XLOC_015898Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028099TCONS_00028099Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..150

Blast
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BLAST of TCONS_00028099-protein vs. Swiss-Prot (Human)
Match: IF122 (Intraflagellar transport protein 122 homolog OS=Homo sapiens GN=IFT122 PE=1 SV=2)

HSP 1 Score: 259.225 bits (661), Expect = 1.635e-79
Identity = 130/238 (54.62%), Postives = 182/238 (76.47%), Query Frame = 0 
Query:    1 LTVAKQGKTLGAYKLSRYAFDKLQTMRVPQRFQQNIDVGSMTIRSKPFQDNQDLLSMCYRCSTTNPLLNNKGNQCINCSQPFIHSFIGFEVLPLVEFILEDGISDEEAVRLIKMDSLSGSSPRDHWQ-ESGNDQSQSMRLENDTGGLDEDDDPFTSKLMSFDQGGGQYQPVVIGQNTLKKLSRTTVFIKEWQAPLRYQYYRNLIPEISITMCKSCWRMYHAEDFELLMLQNGCCPFCR 237
             T+AKQ K LGAY+L+R+A+DKL+ + +P RFQ++I++G++TIR+KPF D+++L+ +CYRCST NPLLNN GN CINC QPFI S   ++VL LVEF LE+GI+DEEA+ LI ++ L     RD  Q E  N+ SQ +RL      +  D+DPFT+KL SF+QGG ++ PVV+ +  L+ +SR  V IK W  PLR+QY+R+L+P+ SITMC SC++M+H+ED+ELL+LQ+GCCP+CR
Sbjct: 1000 FTLAKQSKALGAYRLARHAYDKLRGLYIPARFQKSIELGTLTIRAKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCRQPFIFSASSYDVLHLVEFYLEEGITDEEAISLIDLEVL--RPKRDDRQLEIANNSSQILRLVETKDSIG-DEDPFTAKL-SFEQGGSEFVPVVVSRLVLRSMSRRDVLIKRWPPPLRWQYFRSLLPDASITMCPSCFQMFHSEDYELLVLQHGCCPYCR 1233
The following BLAST results are available for this feature:
BLAST of TCONS_00028099-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IF1221.635e-7954.62Intraflagellar transport protein 122 homolog OS=Ho... [more]
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