TCONS_00028556-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028556-protein
Unique NameTCONS_00028556-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length513

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028556-protein ID=TCONS_00028556-protein|Name=TCONS_00028556-protein|organism=Clytia hemisphaerica|type=polypeptide|length=513bp
MGKHKSRDRSRSRSPHSSSSGKHQHSKKSKKKYSRKDSSSDSSDQESGNR
MSFEEELQKIKEEKRREKELLKSTETPEQRRQRRQAKKEEKEKKFNRLKG
VNDLGYTNTDNPFGDTNLTDNFVWNKKHQQEGTKNIAQKQRHKQEELRDE
LEKVKRRRQEREREKAARDEEMTLMQREKEAAMFSNWEKQEDTFHLQQAR
LRSSIRITNGRAKPIDLLAVYINPEEENLEIQMHEPYAALVGLSIDDLED
LLADITVYLEIDQEKNIDFWEDITIIVKDELAKLKKMRGEVSNRRDVINS
SVQTDVNTIFKGKTYSQLIALQKQIRAKIKAGGSIDVGYWETLLQQLKAI
MAKTRLKERHQKMLKGKLEEMKMESTVDDDAELPSTKRYKARLGRLDEED
NNDEPSGGELKETNKESDNEAGPSSAVEKNQEEGVGEGENPEEEIDEKIE
IQKFTEAELNDKAMKEYEEQCYSPKLIHFGDVDEEKWLKPAEDSLKLSYL
REKVKSGSTVEEV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016189XLOC_016189Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028556TCONS_00028556Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018816Cactin_central
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 43..74
NoneNo IPR availableCOILSCoilCoilcoord: 134..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 372..453
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..168
IPR018816Cactin, central domainPFAMPF10312Cactin_midcoord: 177..360
e-value: 8.1E-63
score: 211.6

Blast
[Close]
BLAST of TCONS_00028556-protein vs. Swiss-Prot (Human)
Match: CATIN (Cactin OS=Homo sapiens GN=CACTIN PE=1 SV=3)

HSP 1 Score: 340.887 bits (873), Expect = 6.757e-109
Identity = 205/467 (43.90%), Postives = 303/467 (64.88%), Query Frame = 0 
Query:   59 KIKEEKRREKELLKSTETPEQRRQRRQAKKEEKEKKFNRLKGVND--LGYTNTDNPFGDTNLTDNFVWNKKHQQEGTKNIAQKQ---RHK--QEELRDELEKVKRRRQEREREKAARDEEMTLMQREKEAAMFSNWEKQEDTFHLQQARLRSSIRITNGRAKPIDLLAVYINPEEENLEIQMHEPYAALVGLSIDDLEDLLADITVYLEIDQEKNIDFWEDITIIVKDELAKLKKMRGE---VSNRRDVINSSVQTDVNTIFKGKTYSQLIALQKQIRAKIKAGG-SIDVGYWETLLQQLKAIMAKTRLKERHQKMLKGKLEEMKMESTVDDDAELPSTKRYKARLGR-LDEEDNNDEPSGGELKETNKESDNEAGPSSAVEKNQEEGVGEGENPEEEIDEKIEIQK------FTEAELNDKAMKEYEEQCYSPKLI--HFGDVDEEKWLKPAEDSLKLSYLREKVK 505
            +++EE+++++EL+K+ ETPE++R RR AKKE KE+K     G  +  +GYTNTDNPFGD NL   F+WNK  +++G  ++ +K+   R+K  QE+ R EL+KVK+ R EREREKA R++E+ ++QREKEA  F  WE+QED FHLQQA+LRS IRI +GRAKPIDLLA YI+ E+++L ++MHEPY  L GL++ D+EDLL DI VY+E++Q KN DFW D+T I +DE++KL+K+         RR+ +N+SV +DV ++FKGKTY+QL  + + I  KI+AGG ++D+GYWE+LLQQL+A MA+ RL+ERHQ +L+ KL ++K E  V+ +   P  K+      R L+ ED    P G           +E GP+        E   +G  P E   +     +        E +L  +++ +Y+   YSP+L+  H   +D    L+P ED  +L   R++++
Sbjct:  145 RLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKIRIRDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVADMEDLLEDIQVYMELEQGKNADFWRDMTTITEDEISKLRKLEASGKGPGERREGVNASVSSDVQSVFKGKTYNQLQVIFQGIEGKIRAGGPNLDMGYWESLLQQLRAHMARARLRERHQDVLRQKLYKLKQEQGVESEPLFPILKQEPQSPSRSLEPEDAAPTPPG---------PSSEGGPA--------EAEVDGATPTEGDGDGDGEGEGEGEAVLMEEDLIQQSLDDYDAGRYSPRLLTAHELPLDAHV-LEPDEDLQRLQLSRQQLQ 593
The following BLAST results are available for this feature:
BLAST of TCONS_00028556-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CATIN6.757e-10943.90Cactin OS=Homo sapiens GN=CACTIN PE=1 SV=3[more]
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