TCONS_00028572-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028572-protein
Unique NameTCONS_00028572-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length247

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028572-protein ID=TCONS_00028572-protein|Name=TCONS_00028572-protein|organism=Clytia hemisphaerica|type=polypeptide|length=247bp
QYMIEPETEEDELFITLPQLVTCNNRTIDVYIANPHNNPTKDLVLTMSAS
PIITAKECTTKPISTKYKPYPLSHEHKEKLDKLLLEYSDVLADKSDPLGT
TDRVRHIIDTGNEKPIRQKPYRLSPSQKDALDKEIDHLLEKEIIRPSNSP
WSSPVVMVHKPDGSIRVCIDYRKLNHITKKDAHPLPKTEEILDQLHGAKI
FSTIDLLSGFYQIAMDEKDIQKTSFATHRGLFEYLRMPMGLCNSPAI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016204XLOC_016204Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028572TCONS_00028572Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 108..247
e-value: 5.6E-51
score: 171.6
NoneNo IPR availableCDDcd01647RT_LTRcoord: 143..247
e-value: 1.75736E-55
score: 177.017
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 83..247
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 158..247
e-value: 3.6E-10
score: 39.7
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 139..247
score: 10.147

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028572-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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