TCONS_00028726-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028726-protein
Unique NameTCONS_00028726-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length420

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028726-protein ID=TCONS_00028726-protein|Name=TCONS_00028726-protein|organism=Clytia hemisphaerica|type=polypeptide|length=420bp
MQVTVTCTTNDSMVLLDVSPDIELENFKVLVQVESGVDSMINMVFFHNGR
ILMDDKKTLGDYGVVNHDVLLFGPRPQGSMGNPPSRAQPVSRPQATSGTG
ASGINWGAIKIPTPGSSTQQQTASPQARQQQQQQQQQQQKNTGGQESPEN
IRQLLLADPHQLSLLKERNPRLADAINNPEEFAKMIEQQRRERLEQERAR
IRLLTADPFDQEAQRMIAEEIRMENVNQNMETAMEHNPEAFAEVYMLYIN
CKVNGHPVKAFVDSGAQMTIMSKACAERCNVMRLVDFRWQGTAVGVGQQK
IIGRIHMGDMEIGNMHLPTSFTILENQPMDMLLGLDMLKRHQCCIDLKKN
SLIFGTNNVETPFLNEAELPECARLNRKRTLASTEQGSSGGGGTSSLQDE
EDRQLAEALAKSQAESGGGS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016293XLOC_016293Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028726TCONS_00028726Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom
IPR019103Peptidase_aspartic_DDI1-type
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0004190aspartic-type endopeptidase activity
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domainGENE3D2.40.70.10coord: 242..363
e-value: 2.4E-32
score: 111.1
IPR021109Aspartic peptidase domainSUPERFAMILY50630Acid proteasescoord: 231..347
IPR019103Aspartic peptidase, DDI1-typePFAMPF09668Asp_proteasecoord: 224..346
e-value: 6.2E-61
score: 203.6
IPR019103Aspartic peptidase, DDI1-typeCDDcd05479RP_DDIcoord: 231..354
e-value: 3.87005E-79
score: 241.688
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 4..70
e-value: 1.2E-5
score: 24.8
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 1..79
score: 11.028
NoneNo IPR availableGENE3D3.10.20.90coord: 1..147
e-value: 5.8E-10
score: 38.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..420
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..147
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 2..88

Blast
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BLAST of TCONS_00028726-protein vs. Swiss-Prot (Human)
Match: DDI2 (Protein DDI1 homolog 2 OS=Homo sapiens GN=DDI2 PE=1 SV=1)

HSP 1 Score: 363.614 bits (932), Expect = 1.669e-123
Identity = 200/425 (47.06%), Postives = 264/425 (62.12%), Query Frame = 0 
Query:    1 MQVTVTCTTND---SMVLLDVSPDIELENFKVLVQVESGVDSMINMVFFHNGRILMDDKKTLGDYGVVNHDVLLF------GPRPQGSMGNPPSRAQPVSRPQATSGTGASGINWGAIKIPTPGSSTQQQTASPQARQQQQQQQQQQQKNTGGQESPENIRQLLLADPHQLSLLKERNPRLADAI--NNPEEFAKMIEQQRRERLEQERARIRLLTADPFDQEAQRMIAEEIRMENVNQNMETAMEHNPEAFAEVYMLYINCKVNGHPVKAFVDSGAQMTIMSKACAERCNVMRLVDFRWQGTAVGVGQQKIIGRIHMGDMEIGNMHLPTSFTILENQPMDMLLGLDMLKRHQCCIDLKKNSLIFGTNNVETPFLNEAELPECARLNRKRTLASTEQGSSGGGGTSSLQDEE--DRQLAEALAKS 412
            M +TV C   D       L V  D EL NF+ L ++ESG+ +  + + +   R L D+ ++L  YG+ + DV++        PRP     N P                   I++ +I +P   S  Q+Q   P   QQ      +   +  G ++P  +R +LLA+PH+LSLLKERNP LA+A+   + E+F++++ +Q+++R  +E+ RIRL +ADPFD EAQ  I E+IR +N+ +NM  AME  PE+F +V MLYINCKVNGHPVKAFVDSGAQMTIMS+ACAERCN+MRLVD RW G A GVG QKIIGR+H+  ++I    LP SF+ILE QPMDMLLGLDMLKRHQC IDLKKN L+ GT   +T FL E ELPECARL             + G G   ++ EE  D++LAEAL KS
Sbjct:    1 MLLTVYCVRRDLSEVTFSLQVDADFELHNFRALCELESGIPAAESQIVYAE-RPLTDNHRSLASYGLKDGDVVILRQKENADPRPPVQFPNLPR------------------IDFSSIAVPGTSSPRQRQ---PPGTQQSHSSPGEITSSPQGLDNPALLRDMLLANPHELSLLKERNPPLAEALLSGDLEKFSRVLVEQQQDRARREQERIRLFSADPFDLEAQAKIEEDIRQQNIEENMTIAMEEAPESFGQVVMLYINCKVNGHPVKAFVDSGAQMTIMSQACAERCNIMRLVDRRWAGIAKGVGTQKIIGRVHLAQVQIEGDFLPCSFSILEEQPMDMLLGLDMLKRHQCSIDLKKNVLVIGTTGSQTTFLPEGELPECARL-------------AYGAGREDVRPEEIADQELAEALQKS 390
The following BLAST results are available for this feature:
BLAST of TCONS_00028726-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DDI21.669e-12347.06Protein DDI1 homolog 2 OS=Homo sapiens GN=DDI2 PE=... [more]
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